RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 TRIM13O60858 407 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 MTA2O94776 668 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SP100P23497 879 aaPredicted RBP21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 PDK3Q15120 406 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ZFPM1Q8IX07 1006 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 TBC1D4O60343 1298 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 PIAS1O75925 651 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ME2P23368 584 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 EFCAB12Q6NXP0 572 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ALYREFQ86V81 257 aaKnown RBP21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ATPAF2Q8N5M1 289 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 COLGALT1Q8NBJ5 622 aa21.73■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 UBA6A0AVT1 1052 aaPredicted RBP21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 C19orf81C9J6K1 198 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 NPTXRO95502 500 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 TXNP10599 105 aaKnown RBP21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CDK7P50613 346 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ZBTB41Q5SVQ8 909 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 EMC10Q5UCC4 262 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 RNF220Q5VTB9 566 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 VSTM1Q6UX27 236 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 WDR27A2RRH5 827 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 H0Y626 953 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 TRIM16O95361 564 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ALBP02768 609 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 MPOP05164 745 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SERPINA6P08185 405 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 PPARGP37231 505 aaPredicted RBP21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 RBBP7Q16576 425 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ARCQ7LC44 396 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CHRNA5P30532 468 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 GLRBP48167 497 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 TWF2Q6IBS0 349 aaKnown RBP21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 BBS12Q6ZW61 710 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ADCK1Q86TW2 530 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CDRT15Q96T59 188 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 TRIM62Q9BVG3 475 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SP110Q9HB58 689 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ALDH1A3P47895 512 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 PRKAA1Q13131 559 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 MPP3Q13368 585 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 GRTP1Q5TC63 336 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 TERB1Q8NA31 727 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 RIN3Q8TB24 985 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 PPP1R2P1Q96PQ5 205 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 IARS2Q9NSE4 1012 aaKnown RBP21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CHKBQ9Y259 395 aa21.72■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 MYL4P12829 197 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 GYS1P13807 737 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SNX32Q86XE0 403 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SLC7A14Q8TBB6 771 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 RMND5BQ96G75 393 aaPredicted RBP21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 PRPF18Q99633 342 aaKnown RBP21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 LMO7Q8WWI1 1683 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 TBC1D12O60347 775 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 TOMM70O94826 608 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 KCNA2P16389 499 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 DENND1BQ6P3S1 775 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 IPMKQ8NFU5 416 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CCDC28BQ9BUN5 200 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 AP5M1Q9H0R1 490 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SYNPO2Q9UMS6 1093 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 PGAM1P18669 254 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 TCF7P36402 384 aaPredicted RBP21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 AVPR1AP37288 418 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 IMPG1Q17R60 797 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 BRSK2Q8IWQ3 736 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SEMA4DQ92854 862 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 CCDC126Q96EE4 140 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 GRIP2Q9C0E4 1043 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 DPP3Q9NY33 737 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 USP20Q9Y2K6 914 aa21.71■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 SIGLEC16A6NMB1 481 aa21.7■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 MOCS2O96007 188 aaPredicted RBP21.7■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 TPBGLP0DKB5 382 aa21.7■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 RBL1P28749 1068 aa21.7■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 IREB2P48200 963 aaKnown RBP21.7■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 ADARP55265 1226 aaKnown RBP21.7■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 RPL7AP62424 266 aaKnown RBP21.7■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 DCTN2Q13561 401 aaKnown RBP21.7■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 C16orf46Q6P387 395 aa21.7■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 AJAP1Q9UKB5 411 aaPredicted RBP21.7■■□□□ 1.07
CHKB-CPT1B-203ENST00000492556 RPL5P46777 297 aaKnown RBP21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 POLNQ7Z5Q5 900 aa21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 SH3TC2Q8TF17 1288 aa21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 RGPD1P0DJD0 1748 aa21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 LRRC37A3O60309 1634 aa21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 CLK2P49760 499 aaKnown RBP21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 NAB1Q13506 487 aa21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 CAPRIN1Q14444 709 aaKnown RBP21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 KRT72Q14CN4 511 aa21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 TRIM16LQ309B1 348 aa21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 TDRPQ86YL5 185 aa21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 ETNK2Q9NVF9 386 aa21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 NCKIPSDQ9NZQ3 722 aa21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 VTI1BQ9UEU0 232 aa21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 KCNK10P57789 538 aa21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 WASHC5Q12768 1159 aa21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 DCAF12L1Q5VU92 463 aa21.7■■□□□ 1.06
CHKB-CPT1B-203ENST00000492556 ACOT9Q9Y305 439 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms