RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 CALRP27797 417 aaKnown RBP9.62□□□□□ -0.87
HDAC3-212ENST00000492407 RDXP35241 583 aaKnown RBP9.62□□□□□ -0.87
HDAC3-212ENST00000492407 CHKAP35790 457 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 PTGER3P43115 390 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 VAMP7P51809 220 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 KIF11P52732 1056 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 MAP3K7CLP57077 242 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 DLG4P78352 724 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 COG7P83436 770 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 GFPT1Q06210 699 aaPredicted RBP9.62□□□□□ -0.87
HDAC3-212ENST00000492407 ZNF252P-AS1Q0IIN9 211 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 SEMA3BQ13214 749 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 SLC14A1Q13336 389 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 SETDB1Q15047 1291 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 Q6ZNB5 142 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 CLEC20AQ6ZU45 233 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 CCDC186Q7Z3E2 898 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 PIP4P1Q86T03 277 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 TTC30AQ86WT1 665 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 EGFL6Q8IUX8 553 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 HSCBQ8IWL3 235 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 TMEFF1Q8IYR6 380 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 PGBD3Q8N328 593 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 ARHGAP18Q8N392 663 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 NAT16Q8N8M0 369 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 CCDC150Q8NCX0 1101 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 RLN3Q8WXF3 142 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 FOXJ1Q92949 421 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 CYFIP2Q96F07 1278 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 BBS2Q9BXC9 721 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 DUSP16Q9BY84 665 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 DCLK3Q9C098 648 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 CD248Q9HCU0 757 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 DNAJC17Q9NVM6 304 aaKnown RBP9.62□□□□□ -0.87
HDAC3-212ENST00000492407 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.62□□□□□ -0.87
HDAC3-212ENST00000492407 SUSD2Q9UGT4 822 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 HELZP42694 1942 aaKnown RBP9.62□□□□□ -0.87
HDAC3-212ENST00000492407 SPAG17Q6Q759 2223 aa9.62□□□□□ -0.87
HDAC3-212ENST00000492407 RALGAPA1Q6GYQ0 2036 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 KIAA1549LQ6ZVL6 1849 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 A0A1W2PQD8 194 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 FAM221BA6H8Z2 402 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 ANTXRLA6NF34 631 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 PATE3B3GLJ2 98 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 TIMM44O43615 452 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 CILPO75339 1184 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 PENKP01210 267 aaPredicted RBP9.61□□□□□ -0.87
HDAC3-212ENST00000492407 HLA-DRAP01903 254 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 SYPP08247 313 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 RALAP11233 206 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 RARGP13631 454 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 KRT13P13646 458 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 CCDC130P13994 396 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 PFKFB1P16118 471 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 ENGP17813 658 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 ACO1P21399 889 aaKnown RBP9.61□□□□□ -0.87
HDAC3-212ENST00000492407 PSMC2P35998 433 aaKnown RBP9.61□□□□□ -0.87
HDAC3-212ENST00000492407 PIK3CAP42336 1068 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 DGKGP49619 791 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 RPL6Q02878 288 aaKnown RBP9.61□□□□□ -0.87
HDAC3-212ENST00000492407 ZNF33AQ06730 810 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 C1orf220Q5T0J3 134 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 CEP135Q66GS9 1140 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 SCARA5Q6ZMJ2 495 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 SFTPA1Q8IWL2 248 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 CHPFQ8IZ52 775 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 GUF1Q8N442 669 aaKnown RBP9.61□□□□□ -0.87
HDAC3-212ENST00000492407 C12orf29Q8N999 325 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 ZNF419Q96HQ0 510 aaPredicted RBP9.61□□□□□ -0.87
HDAC3-212ENST00000492407 SLC2A11Q9BYW1 496 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 NIF3L1Q9GZT8 377 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 CAPN10Q9HC96 672 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 TMEM74BQ9NUR3 256 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 HCN2Q9UL51 889 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 NEUROG3Q9Y4Z2 214 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 EML5Q05BV3 1969 aa9.61□□□□□ -0.87
HDAC3-212ENST00000492407 LAMA1P25391 3075 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 IGHV1OR15-9A0A0B4J2B8 117 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 NEDD8-MDP1E9PL57 170 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 ARHGAP33O14559 1287 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 SCAMP3O14828 347 aaKnown RBP9.6□□□□□ -0.87
HDAC3-212ENST00000492407 GIPC1O14908 333 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 TBX18O95935 607 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 C7P10643 843 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 ITPKAP23677 461 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 NR2F2P24468 414 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 PGFP49763 221 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 ATXN3P54252 364 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-212ENST00000492407 SLC8A3P57103 927 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 DNM1Q05193 864 aaKnown RBP9.6□□□□□ -0.87
HDAC3-212ENST00000492407 ADAM9Q13443 819 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 ENPP2Q13822 863 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 EIF4HQ15056 248 aaKnown RBP9.6□□□□□ -0.87
HDAC3-212ENST00000492407 EDRF1Q3B7T1 1238 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 WDR45BQ5MNZ6 344 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 C10orf120Q5SQS8 335 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 SYCP2LQ5T4T6 812 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 TMCO4Q5TGY1 634 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 KRT39Q6A163 491 aa9.6□□□□□ -0.87
HDAC3-212ENST00000492407 UNQ6494/PRO21346Q6UXR6 183 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms