RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 SLC7A1P30825 629 aa4.81□□□□□ -1.64
PHC3-213ENST00000491258 ALDH7A1P49419 539 aaKnown RBP4.81□□□□□ -1.64
PHC3-213ENST00000491258 STK3Q13188 491 aa4.81□□□□□ -1.64
PHC3-213ENST00000491258 ASIC2Q16515 512 aa4.81□□□□□ -1.64
PHC3-213ENST00000491258 BRDTQ58F21 947 aaPredicted RBP4.81□□□□□ -1.64
PHC3-213ENST00000491258 TMEM199Q8N511 208 aa4.81□□□□□ -1.64
PHC3-213ENST00000491258 METTL25Q8N6Q8 603 aa4.81□□□□□ -1.64
PHC3-213ENST00000491258 FAM71DQ8N9W8 422 aa4.81□□□□□ -1.64
PHC3-213ENST00000491258 VPS50Q96JG6 964 aa4.81□□□□□ -1.64
PHC3-213ENST00000491258 FCRL5Q96RD9 977 aa4.81□□□□□ -1.64
PHC3-213ENST00000491258 PAXBP1Q9Y5B6 917 aa4.81□□□□□ -1.64
PHC3-213ENST00000491258 CUX2O14529 1486 aa4.81□□□□□ -1.64
PHC3-213ENST00000491258 TMEM272A0A1B0GTI8 110 aa4.8□□□□□ -1.64
PHC3-213ENST00000491258 CCP110O43303 1012 aa4.8□□□□□ -1.64
PHC3-213ENST00000491258 PRAMEF2O60811 474 aa4.8□□□□□ -1.64
PHC3-213ENST00000491258 PARP1P09874 1014 aaKnown RBP4.8□□□□□ -1.64
PHC3-213ENST00000491258 ST3GAL2Q16842 350 aa4.8□□□□□ -1.64
PHC3-213ENST00000491258 COL23A1Q86Y22 540 aaPredicted RBP4.8□□□□□ -1.64
PHC3-213ENST00000491258 PIGKQ92643 395 aa4.8□□□□□ -1.64
PHC3-213ENST00000491258 HOOK2Q96ED9 719 aa4.8□□□□□ -1.64
PHC3-213ENST00000491258 STK31Q9BXU1 1019 aa4.8□□□□□ -1.64
PHC3-213ENST00000491258 MLXIPLQ9NP71 852 aa4.8□□□□□ -1.64
PHC3-213ENST00000491258 HOMER2Q9NSB8 354 aa4.8□□□□□ -1.64
PHC3-213ENST00000491258 HDAC9Q9UKV0 1011 aa4.8□□□□□ -1.64
PHC3-213ENST00000491258 MBD3L4A6NDZ8 208 aaPredicted RBP4.79□□□□□ -1.64
PHC3-213ENST00000491258 MBD3L3A6NE82 208 aaPredicted RBP4.79□□□□□ -1.64
PHC3-213ENST00000491258 F8W810 466 aa4.79□□□□□ -1.64
PHC3-213ENST00000491258 PYCARD-AS1I3L0S3 204 aa4.79□□□□□ -1.64
PHC3-213ENST00000491258 CA12O43570 354 aa4.79□□□□□ -1.64
PHC3-213ENST00000491258 MARCH6O60337 910 aa4.79□□□□□ -1.64
PHC3-213ENST00000491258 ZC3H11AO75152 810 aaKnown RBP eCLIP4.79□□□□□ -1.64
PHC3-213ENST00000491258 EPN2O95208 641 aa4.79□□□□□ -1.64
PHC3-213ENST00000491258 TNFRSF8P28908 595 aa4.79□□□□□ -1.64
PHC3-213ENST00000491258 NEK2P51955 445 aa4.79□□□□□ -1.64
PHC3-213ENST00000491258 JAK3P52333 1124 aa4.79□□□□□ -1.64
PHC3-213ENST00000491258 CCDC15Q0P6D6 951 aa4.79□□□□□ -1.64
PHC3-213ENST00000491258 ARHGEF7Q14155 803 aa4.79□□□□□ -1.64
PHC3-213ENST00000491258 LMLNQ96KR4 655 aa4.79□□□□□ -1.64
PHC3-213ENST00000491258 LRGUKQ96M69 825 aa4.79□□□□□ -1.64
PHC3-213ENST00000491258 SACM1LQ9NTJ5 587 aa4.79□□□□□ -1.64
PHC3-213ENST00000491258 MSRB1Q9NZV6 116 aa4.79□□□□□ -1.64
PHC3-213ENST00000491258 STEAP1Q9UHE8 339 aa4.79□□□□□ -1.64
PHC3-213ENST00000491258 UNC13AQ9UPW8 1703 aa4.79□□□□□ -1.64
PHC3-213ENST00000491258 DISP3Q9P2K9 1392 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 SLC22A23A1A5C7 686 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 ERVV-2B6SEH9 535 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 ZNF814B7Z6K7 855 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 TBX3O15119 743 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 USP12O75317 370 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 HSPA6P17066 643 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 KLRC1P26715 233 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 NTSR1P30989 418 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 PGGT1BP53609 377 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 SLC12A2P55011 1212 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 MTA1Q13330 715 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 ZNF324BQ6AW86 544 aaPredicted RBP4.78□□□□□ -1.64
PHC3-213ENST00000491258 USP49Q70CQ1 688 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 MICU3Q86XE3 530 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 RFX6Q8HWS3 928 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 FBXL14Q8N1E6 418 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 IL31RAQ8NI17 732 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 MEIS3Q99687 375 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 ACO2Q99798 780 aaKnown RBP4.78□□□□□ -1.64
PHC3-213ENST00000491258 TUBB6Q9BUF5 446 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 ATP6V0A4Q9HBG4 840 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 NMRK2Q9NPI5 230 aa4.78□□□□□ -1.64
PHC3-213ENST00000491258 ERCC6Q03468 1493 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 A0A1W2PPC1 479 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 RAB27BO00194 218 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 TLX3O43711 291 aaPredicted RBP4.77□□□□□ -1.65
PHC3-213ENST00000491258 MYBP10242 640 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 RPS6KB1P23443 525 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 HOXA7P31268 230 aaPredicted RBP4.77□□□□□ -1.65
PHC3-213ENST00000491258 GALNSP34059 522 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 EIF4A1P60842 406 aaKnown RBP4.77□□□□□ -1.65
PHC3-213ENST00000491258 PTGR1Q14914 329 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 INPP5JQ15735 1006 aaPredicted RBP4.77□□□□□ -1.65
PHC3-213ENST00000491258 CAPRIN2Q6IMN6 1127 aaKnown RBP4.77□□□□□ -1.65
PHC3-213ENST00000491258 KRTAP5-4Q6L8H1 288 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 CLEC9AQ6UXN8 241 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 TFAP2DQ7Z6R9 452 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 P3H2Q8IVL5 708 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 SLC44A5Q8NCS7 719 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 BCAS4Q8TDM0 211 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 SMCR8Q8TEV9 937 aaPredicted RBP4.77□□□□□ -1.65
PHC3-213ENST00000491258 SUCLG2Q96I99 432 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 HIST1H2AAQ96QV6 131 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 CINPQ9BW66 212 aaPredicted RBP4.77□□□□□ -1.65
PHC3-213ENST00000491258 MYLK2Q9H1R3 596 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 AGO4Q9HCK5 861 aaKnown RBP4.77□□□□□ -1.65
PHC3-213ENST00000491258 SELENONQ9NZV5 590 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 ANAPC4Q9UJX5 808 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 PCDHA12Q9UN75 941 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 COL4A3BPQ9Y5P4 624 aa4.77□□□□□ -1.65
PHC3-213ENST00000491258 HEMK1Q9Y5R4 338 aaPredicted RBP4.77□□□□□ -1.65
PHC3-213ENST00000491258 TRIM43BA6NCK2 446 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 IFITM10A6NMD0 228 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 AKAP10O43572 662 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 UGDHO60701 494 aa4.76□□□□□ -1.65
PHC3-213ENST00000491258 SNX2O60749 519 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms