RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 SREBF1P36956 1147 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 RPL26P61254 145 aaKnown RBP11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 POU5F1BQ06416 359 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 CUL2Q13617 745 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 ZNF667Q5HYK9 610 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 PERM1Q5SV97 790 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 PLD3Q8IV08 490 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 CCDC103Q8IW40 242 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 ABRAQ8N0Z2 381 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 NOL6Q9H6R4 1146 aaKnown RBP11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 SLC38A10Q9HBR0 1119 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 ZC4H2Q9NQZ6 224 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 VPS45Q9NRW7 570 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 RBMX2Q9Y388 322 aaKnown RBP11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 BOLA2-SMG1P6H3BVE0 249 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 M0R2N6 131 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 JAK3P52333 1124 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 MTA1Q13330 715 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 BFSP2Q13515 415 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 MTMR1Q13613 665 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 SLC15A2Q16348 729 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 THOC7Q6I9Y2 204 aaKnown RBP11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 CGB2Q6NT52 195 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 SCAIQ8N9R8 606 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 PGBD4Q96DM1 585 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 TBC1D22BQ9NU19 505 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 SAE1Q9UBE0 346 aaPredicted RBP11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 DKK3Q9UBP4 350 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 SUN2Q9UH99 717 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 TRDMT1O14717 391 aaKnown RBP11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 PHGDHO43175 533 aaKnown RBP11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 CRTAMO95727 393 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 KCNQ4P56696 695 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 GCNT1Q02742 428 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 TMC2Q8TDI7 906 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 GIPC2Q8TF65 315 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 CAPSLQ8WWF8 208 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 TLE6Q9H808 572 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 AAASQ9NRG9 546 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 PLLPQ9Y342 182 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 EIF2S1P05198 315 aaKnown RBP11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 DPYSL3Q14195 570 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 SURF1Q15526 300 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 MAPK11Q15759 364 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 NDUFA5Q16718 116 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 C4orf22Q6V702 233 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 CYP2R1Q6VVX0 501 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 FNIP1Q8TF40 1166 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 SLC44A1Q8WWI5 657 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 SPIRE2Q8WWL2 714 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 FAM149B1Q96BN6 582 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 FAM136AQ96C01 138 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 GIN1Q9NXP7 522 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 AFG3L2Q9Y4W6 797 aa11.64□□□□□ -0.55
CRNKL1-204ENST00000490910 LAMA4Q16363 1823 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 MYH7P12883 1935 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 A0A0B4J269 797 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 ASNA1O43681 348 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 BPGMP07738 259 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 POLD1P28340 1107 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 PDK1Q15118 436 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 PRKD1Q15139 912 aaPredicted RBP11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 TBCELQ5QJ74 424 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 TRAPPC3LQ5T215 181 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 FASTKD5Q7L8L6 764 aaKnown RBP11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 FAM47BQ8NA70 645 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 ZSWIM2Q8NEG5 633 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 FNDC8Q8TC99 324 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 ARHGEF1Q92888 912 aaKnown RBP11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 RNF34Q969K3 372 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 PTCD3Q96EY7 689 aaKnown RBP11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 SPATA7Q9P0W8 599 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 PLA2G4CQ9UP65 541 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 RPS6KL1Q9Y6S9 549 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 TSPOAP1O95153 1857 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 TRPC5OSA6NMA1 111 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 M0QYV0 167 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 LYPLA1O75608 230 aaPredicted RBP11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 CALCAP01258 141 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 POLBP06746 335 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 PDGFRAP16234 1089 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 MSX2P35548 267 aaPredicted RBP11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 DEFA1P59665 94 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 DEFA3P59666 94 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 C1orf186Q6ZWK4 172 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 SLC9A9Q8IVB4 645 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 ZNF555Q8NEP9 628 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 SKA1Q96BD8 255 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 CDCA7Q9BWT1 371 aaPredicted RBP11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 IL1RL2Q9HB29 575 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 TBX20Q9UMR3 447 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 TISP43B9A030 160 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 EML1O00423 815 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 SIN3BO75182 1162 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 MAP3K6O95382 1288 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 CHRNB2P17787 502 aa11.63□□□□□ -0.55
CRNKL1-204ENST00000490910 ARPC4P59998 168 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms