RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 IFIT1BQ5T764 474 aaKnown RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 CCDC81Q6ZN84 652 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 AGMOQ6ZNB7 445 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 EEPD1Q7L9B9 569 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 LRP10Q7Z4F1 713 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 GPR141Q7Z602 305 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 PRPF39Q86UA1 669 aaKnown RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 JAZF1Q86VZ6 243 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 TTC30AQ86WT1 665 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 HEATR4Q86WZ0 1026 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 TICAM1Q8IUC6 712 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 CACTIN-AS1Q8N1I8 211 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 PPM1KQ8N3J5 372 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ZCCHC9Q8N567 271 aaKnown RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 POU5F2Q8N7G0 328 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 BANPQ8N9N5 519 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 DAGLBQ8NCG7 672 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 RNF169Q8NCN4 708 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ZNF420Q8TAQ5 688 aaPredicted RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 GSDMBQ8TAX9 411 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ATL1Q8WXF7 558 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 KRT35Q92764 455 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 TAMM41Q96BW9 452 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ISOC1Q96CN7 298 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 HSH2DQ96JZ2 352 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 C9orf72Q96LT7 481 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 DOK1Q99704 481 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 MROQ9BYG7 248 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 SLC7A5P2Q9GIP4 190 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 WWP1Q9H0M0 922 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 CDH19Q9H159 772 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 IRF2BPLQ9H1B7 796 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ZNF395Q9H8N7 513 aaPredicted RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 UGT1A7Q9HAW7 530 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 UGT1A10Q9HAW8 530 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 UGT1A8Q9HAW9 530 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 FKBP14Q9NWM8 211 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 GPRC5DQ9NZD1 345 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ANKMY1Q9P2S6 941 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 PSMC3IPQ9P2W1 217 aaPredicted RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 VPS51Q9UID3 782 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 GTF3C4Q9UKN8 822 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 COG5Q9UP83 839 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 DNM3Q9UQ16 869 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 TMA7Q9Y2S6 64 aaKnown RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 AP4S1Q9Y587 144 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 EMSYQ7Z589 1322 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 CNTNAP5Q8WYK1 1306 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 FAM237BA0A1B0GVD1 139 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 GTPBP10A4D1E9 387 aaKnown RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 TRIM64BA6NI03 449 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 POC1B-GALNT4F8VUJ3 575 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 H3BNH8 94 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 TRPA1O75762 1119 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 BBOX1O75936 387 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 MTA2O94776 668 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 KLHL2O95198 593 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 STAMBPO95630 424 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 KRT6AP02538 564 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 KRT6BP04259 564 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 FGRP09769 529 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 UQCRFS1P1P0C7P4 283 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 NAT2P11245 290 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 SMPD1P17405 629 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 PSMC3P17980 439 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 M6PRP20645 277 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ABCB4P21439 1286 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 COMTP21964 271 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 RPA1P27694 616 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 S100A5P33763 92 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 SOX5P35711 763 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 IREB2P48200 963 aaKnown RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 TUFMP49411 452 aaKnown RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ERFP50548 548 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 KPNA1P52294 538 aaPredicted RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 THOP1P52888 689 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 AP3M2P53677 418 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 TXNL4AP83876 142 aaKnown RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 RELBQ01201 579 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 TFAP4Q01664 338 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 CHRNEQ04844 493 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 CD300CQ08708 224 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 GRB10Q13322 594 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ITGADQ13349 1161 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ORC2Q13416 577 aaPredicted RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 OASLQ15646 514 aaKnown RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 TRIP4Q15650 581 aaPredicted RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 CCNG2Q16589 344 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 CYP2A13Q16696 494 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 DGKDQ16760 1214 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 TIGD2Q4W5G0 525 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 SGO2Q562F6 1265 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 AGAP7PQ5VUJ5 663 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 BTBD8Q5XKL5 378 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 TWF2Q6IBS0 349 aaKnown RBP4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 C4orf22Q6V702 233 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 RFPL4BQ6ZWI9 263 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 DYMQ7RTS9 669 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 PRUNE1Q86TP1 453 aa4.93□□□□□ -1.62
SNRNP40-206ENST00000489853 ALYREFQ86V81 257 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms