RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 SLC9A3R1O14745 358 aaPredicted RBP11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 PAPSS2O95340 614 aaPredicted RBP11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 NFATC1O95644 943 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 SKILP12757 684 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 CHRNB2P17787 502 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 ADORA2BP29275 332 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 MAP3K7CLP57077 242 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 CDK17Q00537 523 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 EML3Q32P44 896 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 TMEM196Q5HYL7 178 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 SFMBT2Q5VUG0 894 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 TMEM270Q6UE05 265 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 NOP9Q86U38 636 aaKnown RBP11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 SLC47A2Q86VL8 602 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 LRRC8AQ8IWT6 810 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 ZBTB44Q8NCP5 570 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 ZMIZ2Q8NF64 920 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 SCAMP5Q8TAC9 235 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 SLC20A1Q8WUM9 679 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 TFAP2BQ92481 460 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 CYFIP2Q96F07 1278 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 RNF38Q9H0F5 515 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 NUCKS1Q9H1E3 243 aaKnown RBP11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 PNPLA8Q9NP80 782 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 RBM12Q9NTZ6 932 aaKnown RBP11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 NENFQ9UMX5 172 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 PCDHB4Q9Y5E5 795 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 CPQQ9Y646 472 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 WNT6Q9Y6F9 365 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 PATJQ8NI35 1801 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 CACNA1IQ9P0X4 2223 aa11.11□□□□□ -0.63
SCAMP4-208ENST00000489554 GREB1Q4ZG55 1949 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 LILRB5O75023 590 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 BEST1O76090 585 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 ZDHHC11BP0C7U3 371 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 MBL2P11226 248 aaPredicted RBP11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 CYP11B1P15538 503 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 FERP16591 822 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 DRD1P21728 446 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 GJA4P35212 333 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 PTK2Q05397 1052 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 GAS6Q14393 721 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 ASIC2Q16515 512 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 FBXO43Q4G163 708 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 ZNF394Q53GI3 561 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 HECTD3Q5T447 861 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 TSSK4Q6SA08 328 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 Q6ZS52 159 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 CLEC20AQ6ZU45 233 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 ZNF571Q7Z3V5 609 aaPredicted RBP11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 ZNF397Q8NF99 534 aaPredicted RBP11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 P2RY13Q9BPV8 354 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 HAUS4Q9H6D7 363 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 TLR8Q9NR97 1041 aaKnown RBP11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 GMIPQ9P107 970 aa11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 CHORDC1Q9UHD1 332 aaPredicted RBP11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCAMP4-208ENST00000489554 E2F8A0AVK6 867 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 SOWAHDA6NJG2 315 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 CCP110O43303 1012 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 COCHO43405 550 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 ATG13O75143 517 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 SERPING1P05155 500 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 PAEPP09466 180 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 TPM1P09493 284 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 TDGF1P13385 188 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 KRT5P13647 590 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 YWHAEP62258 255 aaKnown RBP11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 ZXDBP98169 803 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 FMO1Q01740 532 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 SATB1Q01826 763 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 ARID5AQ03989 594 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 MAPK8IP2Q13387 824 aaPredicted RBP11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 FSTL4Q6MZW2 842 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 RAD9BQ6WBX8 426 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 CCDC112Q8NEF3 446 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 CCDC26Q8TAB7 109 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 SLC30A5Q8TAD4 765 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 CD101Q93033 1021 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 CHFRQ96EP1 664 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 TMEM176AQ96HP8 235 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 HEXIM2Q96MH2 286 aaKnown RBP11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 ZNF830Q96NB3 372 aaPredicted RBP11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 PCDHB18PQ96TA0 734 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 DUSP16Q9BY84 665 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 NACA2Q9H009 215 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 LINC00597Q9H2U6 94 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 SMPD4Q9NXE4 827 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 CFAP97Q9P2B7 532 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 TBC1D14Q9P2M4 693 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 SCML2Q9UQR0 700 aa11.09□□□□□ -0.63
SCAMP4-208ENST00000489554 MYO15AQ9UKN7 3530 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 ANAPC1Q9H1A4 1944 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 SSU72P8A0A1W2PR75 194 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 HHLA1C9JL84 531 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 O00370 1275 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 DDX3XO00571 662 aaKnown RBP eCLIP11.08□□□□□ -0.647e-10■■■□□ 17.7
SCAMP4-208ENST00000489554 TLR5O60602 858 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 TUBB4AP04350 444 aa11.08□□□□□ -0.64
SCAMP4-208ENST00000489554 BRD2P25440 801 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms