RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 KLKB1P03952 638 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 EIF2DP41214 584 aaKnown RBP22.19■■□□□ 1.14
LIME1-207ENST00000489212 FNTBP49356 437 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 MFAP3P55082 362 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 GAD2Q05329 585 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 ARHGAP44Q17R89 818 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 VWA3BQ502W6 1294 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 DPY19L2P1Q6NXN4 242 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 ENOSF1Q7L5Y1 443 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 ETFBKMTQ8IXQ9 262 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 SIX6OS1Q8N1H7 587 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 PHTF2Q8N3S3 785 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 TUBGCP2Q9BSJ2 902 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 NDST4Q9H3R1 872 aa22.19■■□□□ 1.14
LIME1-207ENST00000489212 LSM7Q9UK45 103 aaKnown RBP22.19■■□□□ 1.14
LIME1-207ENST00000489212 ATG13O75143 517 aa22.18■■□□□ 1.14
LIME1-207ENST00000489212 HMBSP08397 361 aa22.18■■□□□ 1.14
LIME1-207ENST00000489212 CHRM1P11229 460 aaPredicted RBP22.18■■□□□ 1.14
LIME1-207ENST00000489212 PRKCSHP14314 528 aaPredicted RBP22.18■■□□□ 1.14
LIME1-207ENST00000489212 SEC13P55735 322 aa22.18■■□□□ 1.14
LIME1-207ENST00000489212 DAOAP59103 153 aa22.18■■□□□ 1.14
LIME1-207ENST00000489212 BSPRYQ5W0U4 402 aa22.18■■□□□ 1.14
LIME1-207ENST00000489212 HEATR6Q6AI08 1181 aaKnown RBP22.18■■□□□ 1.14
LIME1-207ENST00000489212 DENND1BQ6P3S1 775 aa22.18■■□□□ 1.14
LIME1-207ENST00000489212 RSRC2Q7L4I2 434 aaKnown RBP22.18■■□□□ 1.14
LIME1-207ENST00000489212 SCML4Q8N228 414 aa22.18■■□□□ 1.14
LIME1-207ENST00000489212 NAT16Q8N8M0 369 aa22.18■■□□□ 1.14
LIME1-207ENST00000489212 P2RY11Q96G91 374 aa22.18■■□□□ 1.14
LIME1-207ENST00000489212 PNKPQ96T60 521 aa22.18■■□□□ 1.14
LIME1-207ENST00000489212 CNGB3Q9NQW8 809 aa22.18■■□□□ 1.14
LIME1-207ENST00000489212 MARCH2Q9P0N8 246 aa22.18■■□□□ 1.14
LIME1-207ENST00000489212 KCNJ18B7U540 433 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 KAT7O95251 611 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 HOXA6P31267 233 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 GPD2P43304 727 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 COG7P83436 770 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 KDSRQ06136 332 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 KCNJ12Q14500 433 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 ANO4Q32M45 955 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 BTBD8Q5XKL5 378 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 ENOX1Q8TC92 643 aaKnown RBP22.17■■□□□ 1.14
LIME1-207ENST00000489212 USP33Q8TEY7 942 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 CLEC4CQ8WTT0 213 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 SHC3Q92529 594 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 EDEM1Q92611 657 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 HSFY1Q96LI6 401 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 FAM81BQ96LP2 452 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 EPC1Q9H2F5 836 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 ARHGEF4Q9NR80 690 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 NFE2L3Q9Y4A8 694 aa22.17■■□□□ 1.14
LIME1-207ENST00000489212 MYO18AQ92614 2054 aaKnown RBP22.16■■□□□ 1.14
LIME1-207ENST00000489212 A0A0A0MRY4 1105 aa22.16■■□□□ 1.14
LIME1-207ENST00000489212 SLC12A8A0AV02 714 aa22.16■■□□□ 1.14
LIME1-207ENST00000489212 TRIM24O15164 1050 aa22.16■■□□□ 1.14
LIME1-207ENST00000489212 TULP3O75386 442 aa22.16■■□□□ 1.14
LIME1-207ENST00000489212 LETM1O95202 739 aaPredicted RBP22.16■■□□□ 1.14
LIME1-207ENST00000489212 GNA15P30679 374 aa22.16■■□□□ 1.14
LIME1-207ENST00000489212 PXNP49023 591 aaPredicted RBP22.16■■□□□ 1.14
LIME1-207ENST00000489212 SRSF5Q13243 272 aaKnown RBP22.16■■□□□ 1.14
LIME1-207ENST00000489212 C2orf27AQ580R0 203 aa22.16■■□□□ 1.14
LIME1-207ENST00000489212 TCP11X2Q5H9J9 407 aa22.16■■□□□ 1.14
LIME1-207ENST00000489212 TPGS1Q6ZTW0 290 aa22.16■■□□□ 1.14
LIME1-207ENST00000489212 LONP2Q86WA8 852 aa22.16■■□□□ 1.14
LIME1-207ENST00000489212 ZNF606Q8WXB4 792 aa22.16■■□□□ 1.14
LIME1-207ENST00000489212 SLC8A2Q9UPR5 921 aa22.16■■□□□ 1.14
LIME1-207ENST00000489212 HRO43593 1189 aa22.15■■□□□ 1.14
LIME1-207ENST00000489212 APODP05090 189 aa22.15■■□□□ 1.14
LIME1-207ENST00000489212 CORO1AP31146 461 aaKnown RBP22.15■■□□□ 1.14
LIME1-207ENST00000489212 USP8P40818 1118 aa22.15■■□□□ 1.14
LIME1-207ENST00000489212 GRIA2P42262 883 aa22.15■■□□□ 1.14
LIME1-207ENST00000489212 RPL34P49207 117 aaKnown RBP22.15■■□□□ 1.14
LIME1-207ENST00000489212 KCNMA1Q12791 1236 aa22.15■■□□□ 1.14
LIME1-207ENST00000489212 C11orf57Q6ZUT1 292 aaPredicted RBP22.15■■□□□ 1.14
LIME1-207ENST00000489212 SYT13Q7L8C5 426 aa22.15■■□□□ 1.14
LIME1-207ENST00000489212 FMNL3Q8IVF7 1028 aa22.15■■□□□ 1.14
LIME1-207ENST00000489212 HHIPQ96QV1 700 aa22.15■■□□□ 1.14
LIME1-207ENST00000489212 MARK1Q9P0L2 795 aa22.15■■□□□ 1.14
LIME1-207ENST00000489212 SFMBT1Q9UHJ3 866 aa22.15■■□□□ 1.14
LIME1-207ENST00000489212 CYTH4Q9UIA0 394 aa22.15■■□□□ 1.14
LIME1-207ENST00000489212 DNAJC12Q9UKB3 198 aa22.15■■□□□ 1.14
LIME1-207ENST00000489212 AGO1Q9UL18 857 aaKnown RBP22.15■■□□□ 1.14
LIME1-207ENST00000489212 STRIP2Q9ULQ0 834 aa22.15■■□□□ 1.14
LIME1-207ENST00000489212 SMG5Q9UPR3 1016 aaKnown RBP22.15■■□□□ 1.14
LIME1-207ENST00000489212 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.14■■□□□ 1.13
LIME1-207ENST00000489212 NEDD8-MDP1E9PL57 170 aa22.14■■□□□ 1.13
LIME1-207ENST00000489212 THAP12O43422 761 aa22.14■■□□□ 1.13
LIME1-207ENST00000489212 PNMA6AP0CW24 399 aaPredicted RBP22.14■■□□□ 1.13
LIME1-207ENST00000489212 TYRP14679 529 aa22.14■■□□□ 1.13
LIME1-207ENST00000489212 DMC1Q14565 340 aa22.14■■□□□ 1.13
LIME1-207ENST00000489212 EMC10Q5UCC4 262 aa22.14■■□□□ 1.13
LIME1-207ENST00000489212 WDR5BQ86VZ2 330 aa22.14■■□□□ 1.13
LIME1-207ENST00000489212 IRGQQ8WZA9 623 aa22.14■■□□□ 1.13
LIME1-207ENST00000489212 BBS2Q9BXC9 721 aa22.14■■□□□ 1.13
LIME1-207ENST00000489212 MIS12Q9H081 205 aa22.14■■□□□ 1.13
LIME1-207ENST00000489212 ABCC13Q9NSE7 274 aa22.14■■□□□ 1.13
LIME1-207ENST00000489212 OLA1Q9NTK5 396 aaKnown RBP22.14■■□□□ 1.13
LIME1-207ENST00000489212 TAB2Q9NYJ8 693 aa22.14■■□□□ 1.13
LIME1-207ENST00000489212 DEC1Q9P2X7 70 aa22.14■■□□□ 1.13
LIME1-207ENST00000489212 SPTBN4Q9H254 2564 aa22.14■■□□□ 1.13
LIME1-207ENST00000489212 FOXN3O00409 490 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms