RNA–Protein interactions for RNA: ENST00000489169.1

CACUL1-204, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-204ENST00000489169 RIN3Q8TB24 985 aa7.89□□□□□ -1.15
CACUL1-204ENST00000489169 SHKBP1Q8TBC3 707 aa7.89□□□□□ -1.15
CACUL1-204ENST00000489169 TAS1R2Q8TE23 839 aa7.89□□□□□ -1.15
CACUL1-204ENST00000489169 DNAJB3Q8WWF6 145 aa7.89□□□□□ -1.15
CACUL1-204ENST00000489169 RCC1LQ96I51 464 aaKnown RBP7.89□□□□□ -1.15
CACUL1-204ENST00000489169 PKNOX2Q96KN3 472 aa7.89□□□□□ -1.15
CACUL1-204ENST00000489169 MRGPRX3Q96LB0 322 aa7.89□□□□□ -1.15
CACUL1-204ENST00000489169 IFIH1Q9BYX4 1025 aaKnown RBP7.89□□□□□ -1.15
CACUL1-204ENST00000489169 SENP6Q9GZR1 1112 aaPredicted RBP7.89□□□□□ -1.15
CACUL1-204ENST00000489169 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.89□□□□□ -1.15
CACUL1-204ENST00000489169 TRIM39Q9HCM9 518 aa7.89□□□□□ -1.15
CACUL1-204ENST00000489169 UBE2TQ9NPD8 197 aaPredicted RBP7.89□□□□□ -1.15
CACUL1-204ENST00000489169 RAD18Q9NS91 495 aa7.89□□□□□ -1.15
CACUL1-204ENST00000489169 ITGA11Q9UKX5 1188 aa7.89□□□□□ -1.15
CACUL1-204ENST00000489169 TRIM17Q9Y577 477 aa7.89□□□□□ -1.15
CACUL1-204ENST00000489169 LAMA3Q16787 3333 aa7.89□□□□□ -1.15
CACUL1-204ENST00000489169 TRIP12Q14669 1992 aaPredicted RBP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 BTNL10A8MVZ5 291 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 DNM1LO00429 736 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 PJA2O43164 708 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 SART1O43290 800 aaKnown RBP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 TPD52L2O43399 206 aaKnown RBP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 ASS1P00966 412 aaKnown RBP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 CST3P01034 146 aaPredicted RBP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 HARSP12081 509 aaKnown RBP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 H2AFXP16104 143 aaPredicted RBP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 PAX3P23760 479 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 HOXA11P31270 313 aaPredicted RBP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 RAB27AP51159 221 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 NOP14P78316 857 aaKnown RBP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 CAP1Q01518 475 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 CKAP4Q07065 602 aaKnown RBP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 TRPC3Q13507 836 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 SLBPQ14493 270 aaKnown RBP eCLIP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 PTGISQ16647 500 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 IFI16Q16666 785 aaKnown RBP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 HSP90B2PQ58FF3 399 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 FAM47CQ5HY64 1035 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 TDRD10Q5VZ19 366 aaKnown RBP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 TRAPPC11Q7Z392 1133 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 THNSL1Q8IYQ7 743 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 RNF10Q8N5U6 811 aaKnown RBP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 BVESQ8NE79 360 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 GSTCDQ8NEC7 633 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 BAHD1Q8TBE0 780 aaPredicted RBP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 CAGE1Q8TC20 777 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 CYB5D2Q8WUJ1 264 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 FANCD2OSQ96PS1 177 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 TMPRSS13Q9BYE2 586 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 TRIM6Q9C030 488 aaPredicted RBP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 DNAI2Q9GZS0 605 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 CYP3A43Q9HB55 503 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 CWC15Q9P013 229 aaKnown RBP7.88□□□□□ -1.15
CACUL1-204ENST00000489169 CALCOCO1Q9P1Z2 691 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 CNTN6Q9UQ52 1028 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 PTPN22Q9Y2R2 807 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 CITO14578 2027 aa7.88□□□□□ -1.15
CACUL1-204ENST00000489169 RALGAPA2Q2PPJ7 1873 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 UNC79Q9P2D8 2635 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 A0A0A6YYK5 440 aaPredicted RBP7.87□□□□□ -1.15
CACUL1-204ENST00000489169 CCDC151A5D8V7 595 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 FOXN3O00409 490 aaPredicted RBP7.87□□□□□ -1.15
CACUL1-204ENST00000489169 PRODHO43272 600 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 RPS6KA5O75582 802 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 DNAJC8O75937 253 aaPredicted RBP7.87□□□□□ -1.15
CACUL1-204ENST00000489169 VNN1O95497 513 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 CD4P01730 458 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 CXCL8P10145 99 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 GZMAP12544 262 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 KCNE1P15382 129 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 ZSCAN20P17040 1043 aaPredicted RBP7.87□□□□□ -1.15
CACUL1-204ENST00000489169 ATF7P17544 494 aaPredicted RBP7.87□□□□□ -1.15
CACUL1-204ENST00000489169 CYP3A5P20815 502 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 TNFSF9P41273 254 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 GRIA2P42262 883 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 MAGEA1P43355 309 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 PDE6CP51160 858 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 GUCY2FP51841 1108 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 RBP5P82980 135 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 TFAMQ00059 246 aaKnown RBP7.87□□□□□ -1.15
CACUL1-204ENST00000489169 MGAT3Q09327 533 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 CUL2Q13617 745 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 MTF1Q14872 753 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 TMEM132DQ14C87 1099 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 NAB2Q15742 525 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 ERCC6LQ2NKX8 1250 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 XKR4Q5GH76 650 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 ZBTB41Q5SVQ8 909 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 FDX2Q6P4F2 183 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 FBXO38Q6PIJ6 1188 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 TRIM72Q6ZMU5 477 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 NECAB2Q7Z6G3 386 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 STRA8Q7Z7C7 330 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 LRRC52Q8N7C0 313 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 BEST2Q8NFU1 509 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 TRIM58Q8NG06 486 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 MAFAQ8NHW3 353 aaPredicted RBP7.87□□□□□ -1.15
CACUL1-204ENST00000489169 SLC7A14Q8TBB6 771 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 RSPH1Q8WYR4 309 aa7.87□□□□□ -1.15
CACUL1-204ENST00000489169 SEMA4DQ92854 862 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms