RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 RARBP10826 455 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 AKAP5P24588 427 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 MSNP26038 577 aaKnown RBP3.25□□□□□ -1.89
CALD1-221ENST00000489019 FOLR3P41439 243 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 CRKLP46109 303 aaKnown RBP3.25□□□□□ -1.89
CALD1-221ENST00000489019 MAPK10P53779 464 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 HAND2P61296 217 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 UBE2HP62256 183 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 NKX6-1P78426 367 aaPredicted RBP3.25□□□□□ -1.89
CALD1-221ENST00000489019 MRPS35P82673 323 aaKnown RBP3.25□□□□□ -1.89
CALD1-221ENST00000489019 PIGFQ07326 219 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 PIN1Q13526 163 aaPredicted RBP3.25□□□□□ -1.89
CALD1-221ENST00000489019 BOP1Q14137 746 aaKnown RBP3.25□□□□□ -1.89
CALD1-221ENST00000489019 PLS1Q14651 629 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 HLXQ14774 488 aaPredicted RBP3.25□□□□□ -1.89
CALD1-221ENST00000489019 MLC1Q15049 377 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 BRD3Q15059 726 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 PUM3Q15397 648 aaKnown RBP3.25□□□□□ -1.89
CALD1-221ENST00000489019 CCDC152Q4G0S7 254 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 PARP10Q53GL7 1025 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 ATAT1Q5SQI0 421 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 CCDC183Q5T5S1 534 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 SLC9C2Q5TAH2 1124 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 THEMIS2Q5TEJ8 643 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 MEX3CQ5U5Q3 659 aaKnown RBP3.25□□□□□ -1.89
CALD1-221ENST00000489019 STRIP1Q5VSL9 837 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 SUSD4Q5VX71 490 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 TAF2Q6P1X5 1199 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 MICALCLQ6ZW33 695 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 CHST3Q7LGC8 479 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 PPP1R32Q7Z5V6 425 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 TICAM2Q86XR7 235 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 ADGRG3Q86Y34 549 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 AOPEPQ8N6M6 819 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 CELF5Q8N6W0 485 aaKnown RBP3.25□□□□□ -1.89
CALD1-221ENST00000489019 NCOA7Q8NI08 942 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 TTC8Q8TAM2 541 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 TFAP2BQ92481 460 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 SNX19Q92543 992 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 HPS3Q969F9 1004 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 NUP88Q99567 741 aaPredicted RBP3.25□□□□□ -1.89
CALD1-221ENST00000489019 RTFDC1Q9BY42 306 aaPredicted RBP3.25□□□□□ -1.89
CALD1-221ENST00000489019 LRRC2Q9BYS8 371 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 TINAGL1Q9GZM7 467 aaPredicted RBP3.25□□□□□ -1.89
CALD1-221ENST00000489019 WDCPQ9H6R7 721 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 ARNT2Q9HBZ2 717 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 CHST12Q9NRB3 414 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 GNL3LQ9NVN8 582 aaKnown RBP3.25□□□□□ -1.89
CALD1-221ENST00000489019 CFAP97Q9P2B7 532 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 LRIT1Q9P2V4 623 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 FEZ2Q9UHY8 353 aaPredicted RBP3.25□□□□□ -1.89
CALD1-221ENST00000489019 ZNF180Q9UJW8 692 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 TLK1Q9UKI8 766 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 NIP7Q9Y221 180 aaKnown RBP eCLIP3.25□□□□□ -1.89
CALD1-221ENST00000489019 DMTF1Q9Y222 760 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 ANKRD6Q9Y2G4 727 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 NEU2Q9Y3R4 380 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 INSL6Q9Y581 213 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 PCDHA1Q9Y5I3 950 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 NR2E3Q9Y5X4 410 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 COL16A1Q07092 1604 aaPredicted RBP3.25□□□□□ -1.89
CALD1-221ENST00000489019 ABCC12Q96J65 1359 aa3.25□□□□□ -1.89
CALD1-221ENST00000489019 SPATA31A5Q5VU36 1347 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 UBN2Q6ZU65 1347 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 SPATA31A7Q8IWB4 1347 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 WNK3Q9BYP7 1800 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 SPEF2Q9C093 1822 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 E7ENX8 843 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 CPLX1O14810 134 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 MPPED1O15442 326 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 GPAA1O43292 621 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 PRPF3O43395 683 aaKnown RBP3.24□□□□□ -1.89
CALD1-221ENST00000489019 DHX16O60231 1041 aaKnown RBP3.24□□□□□ -1.89
CALD1-221ENST00000489019 PPFIA2O75334 1257 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 VPS4BO75351 444 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 C1QL1O75973 258 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 PDE8BO95263 885 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 ARIH2O95376 493 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 CHRM3P20309 590 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 ADD2P35612 726 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 NPTX2P47972 431 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 EIF5P55010 431 aaKnown RBP3.24□□□□□ -1.89
CALD1-221ENST00000489019 HMGN5P82970 282 aaKnown RBP3.24□□□□□ -1.89
CALD1-221ENST00000489019 TAP2Q03519 686 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 ST3GAL1Q11201 340 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 TCF15Q12870 199 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 ERCC6LQ2NKX8 1250 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 PREPLQ4J6C6 727 aaPredicted RBP3.24□□□□□ -1.89
CALD1-221ENST00000489019 CAVIN4Q5BKX8 364 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 DPY19L2P1Q6NXN4 242 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 FBXO42Q6P3S6 717 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 RD3Q7Z3Z2 195 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 USP37Q86T82 979 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 ANKRD18AQ8IVF6 992 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 GRAMD1CQ8IYS0 662 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 ZNF34Q8IZ26 560 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 PSD4Q8NDX1 1056 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 CAGE1Q8TC20 777 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 BICD2Q8TD16 824 aa3.24□□□□□ -1.89
CALD1-221ENST00000489019 GTF3C6Q969F1 213 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms