RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ADH5P11766 374 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 GNA15P30679 374 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 HOXC13P31276 330 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 CLCN1P35523 988 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 USP8P40818 1118 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 CCR3P51677 355 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 COG7P83436 770 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 MYL5Q02045 173 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 BTBD8Q5XKL5 378 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 ETFBKMTQ8IXQ9 262 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 SIX6OS1Q8N1H7 587 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 PHTF2Q8N3S3 785 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 ZBTB44Q8NCP5 570 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 CLEC4CQ8WTT0 213 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 STK32AQ8WU08 396 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 IRGQQ8WZA9 623 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 P2RY11Q96G91 374 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 VPS16Q9H269 839 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 SPHK2Q9NRA0 654 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 MARCH2Q9P0N8 246 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 RASAL2Q9UJF2 1139 aa16.71■□□□□ 0.27
CTDSP1-209ENST00000488627 CHURC1-FNTBB4DL54 471 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 K7EQS6 105 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 K7ESF4 209 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 THAP12O43422 761 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 MED7O43513 233 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 RNF40O75150 1001 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 UCHL3P15374 230 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 EIF2DP41214 584 aaKnown RBP16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 GAD2Q05329 585 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 GOLGA8FQ08AF8 430 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 GOLGA8DPQ0D2H9 430 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 DRAP1Q14919 205 aaPredicted RBP16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 FBXO43Q4G163 708 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 CAVIN1Q6NZI2 390 aaKnown RBP16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 APTXQ7Z2E3 356 aaKnown RBP16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 TMEM110Q86TL2 294 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 SFTPA1Q8IWL2 248 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 SCUBE3Q8IX30 993 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 EDEM1Q92611 657 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 EXOC4Q96A65 974 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 PLCB1Q9NQ66 1216 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 ABCC13Q9NSE7 274 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 ZSCAN32Q9NX65 697 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 LIMA1Q9UHB6 759 aaKnown RBP16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 LSM7Q9UK45 103 aaKnown RBP16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 PCDHGC3Q9UN70 934 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 FHOD1Q9Y613 1164 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 VPS13AQ96RL7 3174 aa16.7■□□□□ 0.26
CTDSP1-209ENST00000488627 MYO15AQ9UKN7 3530 aa16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 SLC12A8A0AV02 714 aa16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 PES1O00541 588 aaKnown RBP16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 LILRB5O75023 590 aa16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 FBXO21O94952 628 aa16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 FYNP06241 537 aa16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 PTK2Q05397 1052 aa16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 TRIP4Q15650 581 aaPredicted RBP16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 MSANTD2Q6P1R3 559 aa16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 RSRC2Q7L4I2 434 aaKnown RBP16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 ASCL5Q7RTU5 278 aa16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 SLC47A2Q86VL8 602 aa16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 LSM14BQ9BX40 385 aaKnown RBP16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 FAM126AQ9BYI3 521 aaPredicted RBP16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 MIS12Q9H081 205 aa16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 GANQ9H2C0 597 aa16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 LHX5Q9H2C1 402 aa16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 OLA1Q9NTK5 396 aaKnown RBP16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 POLR3BQ9NW08 1133 aaPredicted RBP16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 MARK1Q9P0L2 795 aa16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 SFMBT1Q9UHJ3 866 aa16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 AGO1Q9UL18 857 aaKnown RBP16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 PCDHGA2Q9Y5H1 932 aa16.69■□□□□ 0.26
CTDSP1-209ENST00000488627 MIA3Q5JRA6 1907 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 PAPSS1O43252 624 aaPredicted RBP16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 HMBSP08397 361 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 CORO1AP31146 461 aaKnown RBP16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 HOXA6P31267 233 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 ACADSBP45954 432 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 KLK7P49862 253 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 COPB1P53618 953 aaKnown RBP16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 DMWDQ09019 674 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 ANO6Q4KMQ2 910 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 FMNL3Q8IVF7 1028 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 NAT16Q8N8M0 369 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 PNKPQ96T60 521 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 FUCA2Q9BTY2 467 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 STK33Q9BYT3 514 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 SEMA4AQ9H3S1 761 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 ST7Q9NRC1 585 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 TJP2Q9UDY2 1190 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 STRIP2Q9ULQ0 834 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 SIK3Q9Y2K2 1263 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 MYH10P35580 1976 aa16.68■□□□□ 0.26
CTDSP1-209ENST00000488627 HELZP42694 1942 aaKnown RBP16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 DMDP11532 3685 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 PRR23AA6NEV1 266 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 E5RJQ4 531 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 TRIM24O15164 1050 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 EPHB6O15197 1021 aa16.67■□□□□ 0.26
CTDSP1-209ENST00000488627 ATG13O75143 517 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms