RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SECISBP2LQ93073 1101 aaKnown RBP18.62■□□□□ 0.57
ITGB1-215ENST00000488494 TULP3O75386 442 aa18.61■□□□□ 0.57
ITGB1-215ENST00000488494 CNR2P34972 360 aa18.61■□□□□ 0.57
ITGB1-215ENST00000488494 GRIA2P42262 883 aa18.61■□□□□ 0.57
ITGB1-215ENST00000488494 MTIF2P46199 727 aaKnown RBP18.61■□□□□ 0.57
ITGB1-215ENST00000488494 RGS7P49802 495 aa18.61■□□□□ 0.57
ITGB1-215ENST00000488494 TPD52L1Q16890 204 aaPredicted RBP18.61■□□□□ 0.57
ITGB1-215ENST00000488494 PM20D1Q6GTS8 502 aa18.61■□□□□ 0.57
ITGB1-215ENST00000488494 TRIM65Q6PJ69 517 aa18.61■□□□□ 0.57
ITGB1-215ENST00000488494 PHTF2Q8N3S3 785 aa18.61■□□□□ 0.57
ITGB1-215ENST00000488494 CCDC33Q8N5R6 958 aa18.61■□□□□ 0.57
ITGB1-215ENST00000488494 KCTD13Q8WZ19 329 aa18.61■□□□□ 0.57
ITGB1-215ENST00000488494 BBS2Q9BXC9 721 aa18.61■□□□□ 0.57
ITGB1-215ENST00000488494 LMBRD1Q9NUN5 540 aa18.61■□□□□ 0.57
ITGB1-215ENST00000488494 MARCH2Q9P0N8 246 aa18.61■□□□□ 0.57
ITGB1-215ENST00000488494 GMEB2Q9UKD1 530 aa18.61■□□□□ 0.57
ITGB1-215ENST00000488494 STRIP2Q9ULQ0 834 aa18.61■□□□□ 0.57
ITGB1-215ENST00000488494 PTPRZ1P23471 2315 aaPredicted RBP18.61■□□□□ 0.57
ITGB1-215ENST00000488494 PIK3R2O00459 728 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 APBB3O95704 486 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 CHRM1P11229 460 aaPredicted RBP18.6■□□□□ 0.57
ITGB1-215ENST00000488494 LCP1P13796 627 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 CORO1AP31146 461 aaKnown RBP18.6■□□□□ 0.57
ITGB1-215ENST00000488494 APBA1Q02410 837 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 STILQ15468 1287 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 LAIR1Q6GTX8 287 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 GJB7Q6PEY0 223 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 TPGS1Q6ZTW0 290 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 CEP68Q76N32 757 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.6■□□□□ 0.57
ITGB1-215ENST00000488494 ALLCQ8N6M5 410 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 BHMTQ93088 406 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 GBP4Q96PP9 640 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 THAP9Q9H5L6 903 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 UBE2TQ9NPD8 197 aaPredicted RBP18.6■□□□□ 0.57
ITGB1-215ENST00000488494 DEC1Q9P2X7 70 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 DACH1Q9UI36 760 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 MMP17Q9ULZ9 603 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 SPTBN4Q9H254 2564 aa18.6■□□□□ 0.57
ITGB1-215ENST00000488494 SLC12A8A0AV02 714 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 YJEFN3A6XGL0 299 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 E7ENQ6 273 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 TRIM24O15164 1050 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 CACNG3O60359 315 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 KLF8O95600 359 aaPredicted RBP18.59■□□□□ 0.57
ITGB1-215ENST00000488494 KLKB1P03952 638 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 TYRP14679 529 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 COG7P83436 770 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 CNGA2Q16280 664 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 GRAMD4Q6IC98 578 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 PMF1Q6P1K2 205 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 CAMKK1Q8N5S9 505 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 TSTD1Q8NFU3 115 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 GAB3Q8WWW8 586 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 EDEM1Q92611 657 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 ZDHHC4Q9NPG8 344 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 CNGB3Q9NQW8 809 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 DNAJC17Q9NVM6 304 aaKnown RBP18.59■□□□□ 0.57
ITGB1-215ENST00000488494 MARK1Q9P0L2 795 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 CNTN6Q9UQ52 1028 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 ATG2BQ96BY7 2078 aa18.59■□□□□ 0.57
ITGB1-215ENST00000488494 MYOFQ9NZM1 2061 aa18.58■□□□□ 0.57
ITGB1-215ENST00000488494 CCDC163A0A0D9SF12 145 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 AXIN1O15169 862 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 RPP40O75818 363 aaKnown RBP18.58■□□□□ 0.56
ITGB1-215ENST00000488494 GABBR2O75899 941 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 SLC9A1P19634 815 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 TIE1P35590 1138 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 MFAP3P55082 362 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 DAOAP59103 153 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 MRPS21P82921 87 aaKnown RBP18.58■□□□□ 0.56
ITGB1-215ENST00000488494 HSP90AA4PQ58FG1 418 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 C10orf76Q5T2E6 689 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 BSPRYQ5W0U4 402 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 GBP6Q6ZN66 633 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 ENOSF1Q7L5Y1 443 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 FAM114A1Q8IWE2 563 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 TERB1Q8NA31 727 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 IL17RCQ8NAC3 791 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 RNF139Q8WU17 664 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 SLC35F5Q8WV83 523 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 OLA1Q9NTK5 396 aaKnown RBP18.58■□□□□ 0.56
ITGB1-215ENST00000488494 APEX2Q9UBZ4 518 aa18.58■□□□□ 0.56
ITGB1-215ENST00000488494 GTPBP10A4D1E9 387 aaKnown RBP18.57■□□□□ 0.56
ITGB1-215ENST00000488494 TBC1D3BA6NDS4 549 aa18.57■□□□□ 0.56
ITGB1-215ENST00000488494 ERCC5P28715 1186 aaPredicted RBP18.57■□□□□ 0.56
ITGB1-215ENST00000488494 TNFRSF4P43489 277 aa18.57■□□□□ 0.56
ITGB1-215ENST00000488494 KIR2DL1P43626 348 aaPredicted RBP18.57■□□□□ 0.56
ITGB1-215ENST00000488494 MAN2A1Q16706 1144 aa18.57■□□□□ 0.56
ITGB1-215ENST00000488494 EXOC3L4Q17RC7 722 aa18.57■□□□□ 0.56
ITGB1-215ENST00000488494 PREPLQ4J6C6 727 aaPredicted RBP18.57■□□□□ 0.56
ITGB1-215ENST00000488494 EMC10Q5UCC4 262 aa18.57■□□□□ 0.56
ITGB1-215ENST00000488494 ANO7Q6IWH7 933 aa18.57■□□□□ 0.56
ITGB1-215ENST00000488494 DENND1CQ8IV53 801 aa18.57■□□□□ 0.56
ITGB1-215ENST00000488494 FMNL3Q8IVF7 1028 aa18.57■□□□□ 0.56
ITGB1-215ENST00000488494 SCML4Q8N228 414 aa18.57■□□□□ 0.56
ITGB1-215ENST00000488494 FAM160A2Q8N612 972 aaPredicted RBP18.57■□□□□ 0.56
ITGB1-215ENST00000488494 TXNDC5Q8NBS9 432 aaKnown RBP18.57■□□□□ 0.56
ITGB1-215ENST00000488494 CLEC4CQ8WTT0 213 aa18.57■□□□□ 0.56
ITGB1-215ENST00000488494 PLD4Q96BZ4 506 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms