RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 MARCH2Q9P0N8 246 aa24.81■■□□□ 1.56
RHBDD3-205ENST00000488106 STRIP2Q9ULQ0 834 aa24.81■■□□□ 1.56
RHBDD3-205ENST00000488106 ZFHX2Q9C0A1 2572 aaPredicted RBP24.8■■□□□ 1.56
RHBDD3-205ENST00000488106 STC2O76061 302 aa24.8■■□□□ 1.56
RHBDD3-205ENST00000488106 SP9P0CG40 484 aa24.8■■□□□ 1.56
RHBDD3-205ENST00000488106 OPRD1P41143 372 aa24.8■■□□□ 1.56
RHBDD3-205ENST00000488106 CSTF1Q05048 431 aaKnown RBP24.8■■□□□ 1.56
RHBDD3-205ENST00000488106 PTK2Q05397 1052 aa24.8■■□□□ 1.56
RHBDD3-205ENST00000488106 DRAP1Q14919 205 aaPredicted RBP24.8■■□□□ 1.56
RHBDD3-205ENST00000488106 BSPRYQ5W0U4 402 aa24.8■■□□□ 1.56
RHBDD3-205ENST00000488106 RHBDF2Q6PJF5 856 aa24.8■■□□□ 1.56
RHBDD3-205ENST00000488106 TSSK4Q6SA08 328 aa24.8■■□□□ 1.56
RHBDD3-205ENST00000488106 HTR3DQ70Z44 454 aa24.8■■□□□ 1.56
RHBDD3-205ENST00000488106 SLC47A2Q86VL8 602 aa24.8■■□□□ 1.56
RHBDD3-205ENST00000488106 RNF139Q8WU17 664 aa24.8■■□□□ 1.56
RHBDD3-205ENST00000488106 HSD3B7Q9H2F3 369 aa24.8■■□□□ 1.56
RHBDD3-205ENST00000488106 LIMA1Q9UHB6 759 aaKnown RBP24.8■■□□□ 1.56
RHBDD3-205ENST00000488106 SYCE3A1L190 88 aa24.79■■□□□ 1.56
RHBDD3-205ENST00000488106 GREM1O60565 184 aa24.79■■□□□ 1.56
RHBDD3-205ENST00000488106 UCHL3P15374 230 aa24.79■■□□□ 1.56
RHBDD3-205ENST00000488106 ZNF18P17022 549 aa24.79■■□□□ 1.56
RHBDD3-205ENST00000488106 MEA1Q16626 185 aa24.79■■□□□ 1.56
RHBDD3-205ENST00000488106 C12orf40Q86WS4 652 aa24.79■■□□□ 1.56
RHBDD3-205ENST00000488106 SCML4Q8N228 414 aa24.79■■□□□ 1.56
RHBDD3-205ENST00000488106 IRGQQ8WZA9 623 aa24.79■■□□□ 1.56
RHBDD3-205ENST00000488106 PRMT8Q9NR22 394 aaPredicted RBP24.79■■□□□ 1.56
RHBDD3-205ENST00000488106 FAM207AQ9NSI2 230 aaPredicted RBP24.79■■□□□ 1.56
RHBDD3-205ENST00000488106 OLA1Q9NTK5 396 aaKnown RBP24.79■■□□□ 1.56
RHBDD3-205ENST00000488106 CYTH4Q9UIA0 394 aa24.79■■□□□ 1.56
RHBDD3-205ENST00000488106 SLC12A8A0AV02 714 aa24.78■■□□□ 1.56
RHBDD3-205ENST00000488106 FBXO21O94952 628 aa24.78■■□□□ 1.56
RHBDD3-205ENST00000488106 DRD1P21728 446 aa24.78■■□□□ 1.56
RHBDD3-205ENST00000488106 CLCN1P35523 988 aa24.78■■□□□ 1.56
RHBDD3-205ENST00000488106 CCR3P51677 355 aa24.78■■□□□ 1.56
RHBDD3-205ENST00000488106 COG7P83436 770 aa24.78■■□□□ 1.56
RHBDD3-205ENST00000488106 ANO4Q32M45 955 aa24.78■■□□□ 1.56
RHBDD3-205ENST00000488106 FMNL3Q8IVF7 1028 aa24.78■■□□□ 1.56
RHBDD3-205ENST00000488106 FAM71AQ8IYT1 594 aa24.78■■□□□ 1.56
RHBDD3-205ENST00000488106 GOLGA1Q92805 767 aa24.78■■□□□ 1.56
RHBDD3-205ENST00000488106 NAA15Q9BXJ9 866 aaKnown RBP24.78■■□□□ 1.56
RHBDD3-205ENST00000488106 SPHK2Q9NRA0 654 aa24.78■■□□□ 1.56
RHBDD3-205ENST00000488106 ABCC13Q9NSE7 274 aa24.78■■□□□ 1.56
RHBDD3-205ENST00000488106 FBXO4Q9UKT5 387 aa24.78■■□□□ 1.56
RHBDD3-205ENST00000488106 LGALS16A8MUM7 142 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 E5RJQ4 531 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 RNF40O75150 1001 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 LTFP02788 710 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 ATP1A3P13637 1013 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 PTMSP20962 102 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 CORO1AP31146 461 aaKnown RBP24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 SATB1Q01826 763 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 KDSRQ06136 332 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 PDCLQ13371 301 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 PKN3Q6P5Z2 889 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 Q6ZNB5 142 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 TMEM25Q86YD3 366 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 DHX40Q8IX18 779 aaKnown RBP24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 SCUBE3Q8IX30 993 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 SYNPOQ8N3V7 929 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 SPEM1Q8N4L4 309 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 EZH1Q92800 747 aaPredicted RBP24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 PCMTD1Q96MG8 357 aaPredicted RBP24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 BPIFA3Q9BQP9 254 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 GANQ9H2C0 597 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 PLCB1Q9NQ66 1216 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 SFMBT1Q9UHJ3 866 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 R4GN57 208 aa24.77■■□□□ 1.56
RHBDD3-205ENST00000488106 RIF1Q5UIP0 2472 aaKnown RBP24.76■■□□□ 1.55
RHBDD3-205ENST00000488106 MSI1O43347 362 aaKnown RBP24.76■■□□□ 1.55
RHBDD3-205ENST00000488106 ACADSBP45954 432 aa24.76■■□□□ 1.55
RHBDD3-205ENST00000488106 SLC6A11P48066 632 aa24.76■■□□□ 1.55
RHBDD3-205ENST00000488106 RPL34P49207 117 aaKnown RBP24.76■■□□□ 1.55
RHBDD3-205ENST00000488106 GAD2Q05329 585 aa24.76■■□□□ 1.55
RHBDD3-205ENST00000488106 SYCP1Q15431 976 aa24.76■■□□□ 1.55
RHBDD3-205ENST00000488106 TPGS1Q6ZTW0 290 aa24.76■■□□□ 1.55
RHBDD3-205ENST00000488106 NAT16Q8N8M0 369 aa24.76■■□□□ 1.55
RHBDD3-205ENST00000488106 FAM149B1Q96BN6 582 aa24.76■■□□□ 1.55
RHBDD3-205ENST00000488106 SLC4A5Q9BY07 1137 aa24.76■■□□□ 1.55
RHBDD3-205ENST00000488106 C2orf42Q9NWW7 574 aa24.76■■□□□ 1.55
RHBDD3-205ENST00000488106 PCDHGC3Q9UN70 934 aa24.76■■□□□ 1.55
RHBDD3-205ENST00000488106 FRYLO94915 3013 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 RALGAPA1Q6GYQ0 2036 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 NEDD8-MDP1E9PL57 170 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 F8VZ95 297 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 KLKB1P03952 638 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 KRT9P35527 623 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 NBL1P41271 181 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 CXCL12P48061 93 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 ZNF165P49910 485 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 POLR2FP61218 127 aaKnown RBP24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 UBXN1Q04323 297 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 DENND1CQ8IV53 801 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 C1orf131Q8NDD1 294 aaKnown RBP24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 STK32AQ8WU08 396 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 BHMTQ93088 406 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 FUCA2Q9BTY2 467 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 TJP2Q9UDY2 1190 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 SIK3Q9Y2K2 1263 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 FAM186AA6NE01 2351 aa24.75■■□□□ 1.55
RHBDD3-205ENST00000488106 EPHB6O15197 1021 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms