RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 TMEFF1Q8IYR6 380 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 PGBD3Q8N328 593 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 TERB1Q8NA31 727 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 CCDC150Q8NCX0 1101 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 P2RY11Q96G91 374 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 ACOX2Q99424 681 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 BBS2Q9BXC9 721 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 TMEM74BQ9NUR3 256 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 DNAJC17Q9NVM6 304 aaKnown RBP12.85□□□□□ -0.35
VPS16-208ENST00000487461 MARK1Q9P0L2 795 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 WDR35Q9P2L0 1181 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 DNMT3LQ9UJW3 386 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 LSM7Q9UK45 103 aaKnown RBP12.85□□□□□ -0.35
VPS16-208ENST00000487461 USP3Q9Y6I4 520 aa12.85□□□□□ -0.35
VPS16-208ENST00000487461 MYH10P35580 1976 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 A0A1W2PQF6 199 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 PRRT4C9JH25 899 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 CACNG3O60359 315 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 KRT37O76014 449 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 KLKB1P03952 638 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 GABRG2P18507 467 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 NTSR1P30989 418 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 PTGER3P43115 390 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 BYSLQ13895 437 aaKnown RBP12.84□□□□□ -0.35
VPS16-208ENST00000487461 EDRF1Q3B7T1 1238 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 EGFLAMQ63HQ2 1017 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 NUDT18Q6ZVK8 323 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 ARMCX6Q7L4S7 300 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 CCDC186Q7Z3E2 898 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 TRMT11Q7Z4G4 463 aaKnown RBP12.84□□□□□ -0.35
VPS16-208ENST00000487461 ZNF276Q8N554 614 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 SLC4A11Q8NBS3 891 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 TATDN2Q93075 761 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 SPACA7Q96KW9 195 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 XPO6Q96QU8 1125 aaKnown RBP12.84□□□□□ -0.35
VPS16-208ENST00000487461 CD248Q9HCU0 757 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 CISHQ9NSE2 258 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 RAB20Q9NX57 234 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 NAGPAQ9UK23 515 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 ATP6V1DQ9Y5K8 247 aa12.84□□□□□ -0.35
VPS16-208ENST00000487461 NUP205Q92621 2012 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 GIPC1O14908 333 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 CETN3O15182 167 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 STC2O76061 302 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 HOXB2P14652 356 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 PSEN1P49768 467 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 RAD23BP54727 409 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 GOLGA8FQ08AF8 430 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 GOLGA8DPQ0D2H9 430 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 PNOCQ13519 176 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 DAB2IPQ5VWQ8 1189 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 PSAPL1Q6NUJ1 521 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 KIAA1211LQ6NV74 962 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 DEFB119Q8N690 84 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 FBXL13Q8NEE6 735 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 BHMTQ93088 406 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 ERLEC1Q96DZ1 483 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 TMEM176AQ96HP8 235 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 FAXDC2Q96IV6 333 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 ARID3AQ99856 593 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 UBXN6Q9BZV1 441 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 TMEM9BQ9NQ34 198 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 PLK2Q9NYY3 685 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 CLIC5Q9NZA1 410 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 FBXO10Q9UK96 956 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 ANGPTL2Q9UKU9 493 aa12.83□□□□□ -0.36
VPS16-208ENST00000487461 CHD8Q9HCK8 2581 aa12.82□□□□□ -0.36
VPS16-208ENST00000487461 RALAP11233 206 aa12.82□□□□□ -0.36
VPS16-208ENST00000487461 ITPKAP23677 461 aa12.82□□□□□ -0.36
VPS16-208ENST00000487461 PRCPP42785 496 aa12.82□□□□□ -0.36
VPS16-208ENST00000487461 MXI1P50539 228 aa12.82□□□□□ -0.36
VPS16-208ENST00000487461 TRIM61Q5EBN2 209 aa12.82□□□□□ -0.36
VPS16-208ENST00000487461 RAB41Q5JT25 222 aa12.82□□□□□ -0.36
VPS16-208ENST00000487461 SPDYCQ5MJ68 293 aa12.82□□□□□ -0.36
VPS16-208ENST00000487461 ARHGAP17Q68EM7 881 aa12.82□□□□□ -0.36
VPS16-208ENST00000487461 SDE2Q6IQ49 451 aa12.82□□□□□ -0.36
VPS16-208ENST00000487461 PIGZQ86VD9 579 aa12.82□□□□□ -0.36
VPS16-208ENST00000487461 SYT12Q8IV01 421 aa12.82□□□□□ -0.36
VPS16-208ENST00000487461 CHPFQ8IZ52 775 aa12.82□□□□□ -0.36
VPS16-208ENST00000487461 FMR1NBQ8N0W7 255 aaPredicted RBP12.82□□□□□ -0.36
VPS16-208ENST00000487461 IPO4Q8TEX9 1081 aaKnown RBP12.82□□□□□ -0.36
VPS16-208ENST00000487461 NDRG1Q92597 394 aaKnown RBP12.82□□□□□ -0.36
VPS16-208ENST00000487461 DNAI2Q9GZS0 605 aa12.82□□□□□ -0.36
VPS16-208ENST00000487461 CALCOCO1Q9P1Z2 691 aa12.82□□□□□ -0.36
VPS16-208ENST00000487461 EVLQ9UI08 416 aaPredicted RBP12.82□□□□□ -0.36
VPS16-208ENST00000487461 PILRBQ9UKJ0 227 aa12.82□□□□□ -0.36
VPS16-208ENST00000487461 KMT2BQ9UMN6 2715 aaPredicted RBP12.82□□□□□ -0.36
VPS16-208ENST00000487461 MAP1BP46821 2468 aaKnown RBP12.81□□□□□ -0.36
VPS16-208ENST00000487461 WASH3PC4AMC7 463 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 TULP2O00295 520 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 STX10O60499 249 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 HMBSP08397 361 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 EPB41P11171 864 aaKnown RBP12.81□□□□□ -0.36
VPS16-208ENST00000487461 DGKGP49619 791 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 NOVA1P51513 510 aaKnown RBP12.81□□□□□ -0.36
VPS16-208ENST00000487461 PMS1P54277 932 aaKnown RBP12.81□□□□□ -0.36
VPS16-208ENST00000487461 COG7P83436 770 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 SHC2P98077 582 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 EFEMP1Q12805 493 aa12.81□□□□□ -0.36
VPS16-208ENST00000487461 UAP1L1Q3KQV9 507 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms