RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 ANKRD52Q8NB46 1076 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 SLC4A11Q8NBS3 891 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 ENGASEQ8NFI3 743 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 ERCC4Q92889 916 aaPredicted RBP13.09□□□□□ -0.31
SREBF1-215ENST00000487401 TIGD1Q96MW7 591 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 ARID3AQ99856 593 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 ZDHHC4Q9NPG8 344 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 CLIC5Q9NZA1 410 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 RASAL2Q9UJF2 1139 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 ZNF510Q9Y2H8 683 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 USP3Q9Y6I4 520 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 TCHHQ07283 1943 aa13.09□□□□□ -0.31
SREBF1-215ENST00000487401 PSMA7O14818 248 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 TRIM24O15164 1050 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 ADAM23O75077 832 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 CD19P15391 556 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 BCKDHBP21953 392 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 NTSR1P30989 418 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 DHPSP49366 369 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-215ENST00000487401 PMS1P54277 932 aaKnown RBP13.08□□□□□ -0.32
SREBF1-215ENST00000487401 EFEMP1Q12805 493 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 CUL2Q13617 745 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 PMS2CLQ68D20 193 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 RNF43Q68DV7 783 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 RSRC2Q7L4I2 434 aaKnown RBP13.08□□□□□ -0.32
SREBF1-215ENST00000487401 LPCAT2Q7L5N7 544 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 CYP2U1Q7Z449 544 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 PIGZQ86VD9 579 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 ZC3H3Q8IXZ2 948 aaKnown RBP13.08□□□□□ -0.32
SREBF1-215ENST00000487401 ZNF276Q8N554 614 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 OLIG1Q8TAK6 271 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 RLN3Q8WXF3 142 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 DHTKD1Q96HY7 919 aaPredicted RBP13.08□□□□□ -0.32
SREBF1-215ENST00000487401 DCLK3Q9C098 648 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 METTL14Q9HCE5 456 aaKnown RBP13.08□□□□□ -0.32
SREBF1-215ENST00000487401 RXFP3Q9NSD7 469 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 MARK1Q9P0L2 795 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 HESX1Q9UBX0 185 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 STRIP2Q9ULQ0 834 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 STARD13Q9Y3M8 1113 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 CEP250Q9BV73 2442 aa13.08□□□□□ -0.32
SREBF1-215ENST00000487401 KHNYNO15037 678 aaKnown RBP13.07□□□□□ -0.32
SREBF1-215ENST00000487401 CACNG3O60359 315 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 HMBSP08397 361 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 CHRM1P11229 460 aaPredicted RBP13.07□□□□□ -0.32
SREBF1-215ENST00000487401 HOXB2P14652 356 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 P2RY2P41231 377 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 PPP1R2P41236 205 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 WASP42768 502 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 DGKGP49619 791 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 YWHAGP61981 247 aaKnown RBP eCLIP13.07□□□□□ -0.32
SREBF1-215ENST00000487401 LRMPQ12912 555 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 GOLGA7BQ2TAP0 167 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 SGO2Q562F6 1265 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 ISM2Q6H9L7 571 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 TCEAL6Q6IPX3 200 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 Q6ZNB5 142 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 CHPFQ8IZ52 775 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 SPATA20Q8TB22 786 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 PIGKQ92643 395 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 BHMTQ93088 406 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 TCEAL3Q969E4 200 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 LRRC4Q9HBW1 653 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 MARCH2Q9P0N8 246 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 KIAA1257Q9ULG3 409 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 COQ4Q9Y3A0 265 aa13.07□□□□□ -0.32
SREBF1-215ENST00000487401 FANCMQ8IYD8 2048 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 SLC12A8A0AV02 714 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 TRIM49BA6NDI0 452 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 STC2O76061 302 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 ZBED1O96006 694 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 ADRB1P08588 477 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 TBXAS1P24557 533 aaPredicted RBP13.06□□□□□ -0.32
SREBF1-215ENST00000487401 CORO1AP31146 461 aaKnown RBP13.06□□□□□ -0.32
SREBF1-215ENST00000487401 CHKAP35790 457 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 TKTL1P51854 596 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 BCAT1P54687 386 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 CETN1Q12798 172 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 CCDC40Q4G0X9 1142 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 EGFLAMQ63HQ2 1017 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 KLHL10Q6JEL2 608 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 ELOA2Q8IYF1 753 aaPredicted RBP13.06□□□□□ -0.32
SREBF1-215ENST00000487401 CEP63Q96MT8 703 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 IPO9Q96P70 1041 aaKnown RBP13.06□□□□□ -0.32
SREBF1-215ENST00000487401 EDEM2Q9BV94 578 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 PLK2Q9NYY3 685 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 TSPAN16Q9UKR8 245 aa13.06□□□□□ -0.32
SREBF1-215ENST00000487401 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 XPO1O14980 1071 aaKnown RBP13.05□□□□□ -0.32
SREBF1-215ENST00000487401 KLKB1P03952 638 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 CYBBP04839 570 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 CISD3P0C7P0 127 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 VDRP11473 427 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 PDE4CQ08493 712 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 BST2Q10589 180 aaKnown RBP13.05□□□□□ -0.32
SREBF1-215ENST00000487401 MAP7D1Q3KQU3 841 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 RAB41Q5JT25 222 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 SPDYCQ5MJ68 293 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 DAB2IPQ5VWQ8 1189 aa13.05□□□□□ -0.32
SREBF1-215ENST00000487401 TOGARAM2Q6ZUX3 1019 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms