RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 NPC1O15118 1278 aa12.43□□□□□ -0.42
TRIM56-204ENST00000487252 SLC16A4O15374 487 aa12.43□□□□□ -0.42
TRIM56-204ENST00000487252 LZTS3O60299 673 aaPredicted RBP12.43□□□□□ -0.42
TRIM56-204ENST00000487252 NEMFO60524 1076 aa12.43□□□□□ -0.42
TRIM56-204ENST00000487252 MAPTP10636 758 aaKnown RBP12.43□□□□□ -0.42
TRIM56-204ENST00000487252 EPHA8P29322 1005 aaPredicted RBP12.43□□□□□ -0.42
TRIM56-204ENST00000487252 INHBCP55103 352 aa12.43□□□□□ -0.42
TRIM56-204ENST00000487252 GSE1Q14687 1217 aa12.43□□□□□ -0.42
TRIM56-204ENST00000487252 ECM1Q16610 540 aa12.43□□□□□ -0.42
TRIM56-204ENST00000487252 DENND5BQ6ZUT9 1274 aa12.43□□□□□ -0.42
TRIM56-204ENST00000487252 PDCL2Q8N4E4 241 aa12.43□□□□□ -0.42
TRIM56-204ENST00000487252 TMEM161BQ8NDZ6 487 aa12.43□□□□□ -0.42
TRIM56-204ENST00000487252 KCNN1Q92952 543 aa12.43□□□□□ -0.42
TRIM56-204ENST00000487252 CCDC97Q96F63 343 aaPredicted RBP12.43□□□□□ -0.42
TRIM56-204ENST00000487252 MARK1Q9P0L2 795 aa12.43□□□□□ -0.42
TRIM56-204ENST00000487252 THAP10Q9P2Z0 257 aaPredicted RBP12.43□□□□□ -0.42
TRIM56-204ENST00000487252 CSMD1Q96PZ7 3565 aa12.43□□□□□ -0.42
TRIM56-204ENST00000487252 HIP1RO75146 1068 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 ABCB4P21439 1286 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 CDC25AP30304 524 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 ANAPC15P60006 121 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 RACK1P63244 317 aaKnown RBP12.42□□□□□ -0.42
TRIM56-204ENST00000487252 NOP14P78316 857 aaKnown RBP12.42□□□□□ -0.42
TRIM56-204ENST00000487252 STRN3Q13033 797 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 CLN3Q13286 438 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 TMEM132DQ14C87 1099 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 PROX2Q3B8N5 592 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 KRTAP21-3Q3LHN1 58 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 FAM171BQ6P995 826 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 VSTM1Q6UX27 236 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 SCN4BQ8IWT1 228 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 KCNB2Q92953 911 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 SLC46A1Q96NT5 459 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 ACE2Q9BYF1 805 aaPredicted RBP12.42□□□□□ -0.42
TRIM56-204ENST00000487252 TMEM60Q9H2L4 133 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 LRRC4CQ9HCJ2 640 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 GJB4Q9NTQ9 266 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 DDX43Q9NXZ2 648 aaKnown RBP12.42□□□□□ -0.42
TRIM56-204ENST00000487252 PLEKHB1Q9UF11 243 aaPredicted RBP12.42□□□□□ -0.42
TRIM56-204ENST00000487252 FBXO10Q9UK96 956 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 C2CD2Q9Y426 696 aa12.42□□□□□ -0.42
TRIM56-204ENST00000487252 COL27A1Q8IZC6 1860 aaPredicted RBP12.42□□□□□ -0.42
TRIM56-204ENST00000487252 A0A1W2PNU3 283 aaPredicted RBP12.41□□□□□ -0.42
TRIM56-204ENST00000487252 OGTO15294 1046 aa12.41□□□□□ -0.42
TRIM56-204ENST00000487252 GREM1O60565 184 aa12.41□□□□□ -0.42
TRIM56-204ENST00000487252 USP12O75317 370 aa12.41□□□□□ -0.42
TRIM56-204ENST00000487252 WNT1P04628 370 aa12.41□□□□□ -0.42
TRIM56-204ENST00000487252 MBL2P11226 248 aaPredicted RBP12.41□□□□□ -0.42
TRIM56-204ENST00000487252 ACAT1P24752 427 aaKnown RBP12.41□□□□□ -0.42
TRIM56-204ENST00000487252 MYL7Q01449 175 aa12.41□□□□□ -0.42
TRIM56-204ENST00000487252 NR5A1Q13285 461 aa12.41□□□□□ -0.42
TRIM56-204ENST00000487252 CLEC17AQ6ZS10 378 aa12.41□□□□□ -0.42
TRIM56-204ENST00000487252 FAM124AQ86V42 546 aa12.41□□□□□ -0.42
TRIM56-204ENST00000487252 SPATA2LQ8IUW3 424 aaPredicted RBP12.41□□□□□ -0.42
TRIM56-204ENST00000487252 WBP2Q969T9 261 aa12.41□□□□□ -0.42
TRIM56-204ENST00000487252 XPO6Q96QU8 1125 aaKnown RBP12.41□□□□□ -0.42
TRIM56-204ENST00000487252 TRIM9Q9C026 710 aa12.41□□□□□ -0.42
TRIM56-204ENST00000487252 EPN3Q9H201 632 aa12.41□□□□□ -0.42
TRIM56-204ENST00000487252 EHD2Q9NZN4 543 aa12.41□□□□□ -0.42
TRIM56-204ENST00000487252 CPSF3Q9UKF6 684 aaKnown RBP12.41□□□□□ -0.42
TRIM56-204ENST00000487252 L1RE1Q9UN81 338 aa12.41□□□□□ -0.42
TRIM56-204ENST00000487252 ZFHX3Q15911 3703 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 CDRT15L2A8MXV6 281 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 C10orf142B7Z368 130 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 GABRDO14764 452 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 IGHV4-34P06331 123 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 FAM87AP0C7U9 286 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 ACADMP11310 421 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 TYRP14679 529 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 RXRGP48443 463 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 C21orf59P57076 290 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 SV2CQ496J9 727 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 ADAT2Q7Z6V5 191 aaKnown RBP12.4□□□□□ -0.42
TRIM56-204ENST00000487252 ADGRF2Q8IZF7 708 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 RBBP8NLQ8NC74 664 aaPredicted RBP12.4□□□□□ -0.42
TRIM56-204ENST00000487252 EXTL1Q92935 676 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 PRR11Q96HE9 360 aaPredicted RBP12.4□□□□□ -0.42
TRIM56-204ENST00000487252 CCNL2Q96S94 520 aaPredicted RBP12.4□□□□□ -0.42
TRIM56-204ENST00000487252 ASB7Q9H672 318 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 DPP3Q9NY33 737 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 WDR35Q9P2L0 1181 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 TJP2Q9UDY2 1190 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 NF1P21359 2839 aa12.4□□□□□ -0.42
TRIM56-204ENST00000487252 A0A0B4J269 797 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 NEDD8-MDP1E9PL57 170 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 COCHO43405 550 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 PPFIA2O75334 1257 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 SEMA4FO95754 770 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 RPS6KB1P23443 525 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 AFMP43652 599 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 DGKGP49619 791 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 BCAT1P54687 386 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 TAF10Q12962 218 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 BNIP3Q12983 259 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 IGFBP7Q16270 282 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 C1orf186Q6ZWK4 172 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 OSTM1Q86WC4 334 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 TMEM86AQ8N2M4 240 aa12.39□□□□□ -0.43
TRIM56-204ENST00000487252 KRI1Q8N9T8 703 aaKnown RBP12.39□□□□□ -0.43
TRIM56-204ENST00000487252 ERMNQ8TAM6 284 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms