RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 BCAR1P56945 870 aa27.11■■□□□ 1.93
HLA-C-208ENST00000487245 BST2Q10589 180 aaKnown RBP27.11■■□□□ 1.93
HLA-C-208ENST00000487245 SOWAHAQ2M3V2 549 aa27.11■■□□□ 1.93
HLA-C-208ENST00000487245 ZC3H18Q86VM9 953 aaKnown RBP27.11■■□□□ 1.93
HLA-C-208ENST00000487245 ANKRD52Q8NB46 1076 aa27.11■■□□□ 1.93
HLA-C-208ENST00000487245 C18orf25Q96B23 403 aaPredicted RBP27.11■■□□□ 1.93
HLA-C-208ENST00000487245 SLC7A6OSQ96CW6 309 aaPredicted RBP27.11■■□□□ 1.93
HLA-C-208ENST00000487245 MANSC1Q9H8J5 431 aa27.11■■□□□ 1.93
HLA-C-208ENST00000487245 CDHR5Q9HBB8 845 aa27.11■■□□□ 1.93
HLA-C-208ENST00000487245 LNPEPQ9UIQ6 1025 aa27.11■■□□□ 1.93
HLA-C-208ENST00000487245 PIRO00625 290 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 TOMM70O94826 608 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 TGDSO95455 350 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 IL4RP24394 825 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 ETV4P43268 484 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 BCAT1P54687 386 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 PTK7Q13308 1070 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 ACCSLQ4AC99 568 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 FBXO47Q5MNV8 452 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 SPRYD7Q5W111 196 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 C1orf228Q6PIY5 440 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 SCUBE3Q8IX30 993 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 FAF2Q96CS3 445 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 THOC1Q96FV9 657 aaKnown RBP27.1■■□□□ 1.93
HLA-C-208ENST00000487245 CXCL16Q9H2A7 254 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 TLE6Q9H808 572 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 GDAP2Q9NXN4 497 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 GNEQ9Y223 722 aaKnown RBP27.1■■□□□ 1.93
HLA-C-208ENST00000487245 L3MBTL1Q9Y468 752 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 KBTBD13C9JR72 458 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 ZFXP17010 805 aaPredicted RBP27.1■■□□□ 1.93
HLA-C-208ENST00000487245 RPL34P49207 117 aaKnown RBP27.1■■□□□ 1.93
HLA-C-208ENST00000487245 SLC26A9Q7LBE3 791 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 APBB2Q92870 758 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 SNRNP25Q9BV90 132 aaKnown RBP27.1■■□□□ 1.93
HLA-C-208ENST00000487245 SLC17A7Q9P2U7 560 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 NME7Q9Y5B8 376 aa27.1■■□□□ 1.93
HLA-C-208ENST00000487245 HGSO14964 777 aaPredicted RBP27.09■■□□□ 1.93
HLA-C-208ENST00000487245 ADCY6O43306 1168 aa27.09■■□□□ 1.93
HLA-C-208ENST00000487245 LPXNO60711 386 aa27.09■■□□□ 1.93
HLA-C-208ENST00000487245 C1QAP02745 245 aa27.09■■□□□ 1.93
HLA-C-208ENST00000487245 GSTA2P09210 222 aa27.09■■□□□ 1.93
HLA-C-208ENST00000487245 TARSP26639 723 aaKnown RBP27.09■■□□□ 1.93
HLA-C-208ENST00000487245 MFSD10Q14728 455 aa27.09■■□□□ 1.93
HLA-C-208ENST00000487245 RAB6CQ53S08 254 aa27.09■■□□□ 1.93
HLA-C-208ENST00000487245 PQLC3Q8N755 202 aa27.09■■□□□ 1.93
HLA-C-208ENST00000487245 SH3TC2Q8TF17 1288 aa27.09■■□□□ 1.93
HLA-C-208ENST00000487245 ADAM33Q9BZ11 813 aa27.09■■□□□ 1.93
HLA-C-208ENST00000487245 RAB6CQ9H0N0 254 aa27.09■■□□□ 1.93
HLA-C-208ENST00000487245 SNX25Q9H3E2 840 aa27.09■■□□□ 1.93
HLA-C-208ENST00000487245 CXorf56Q9H5V9 222 aa27.09■■□□□ 1.93
HLA-C-208ENST00000487245 HAO1Q9UJM8 370 aa27.09■■□□□ 1.93
HLA-C-208ENST00000487245 ZNF180Q9UJW8 692 aa27.09■■□□□ 1.93
HLA-C-208ENST00000487245 IKBKGQ9Y6K9 419 aa27.09■■□□□ 1.93
HLA-C-208ENST00000487245 INHBAP08476 426 aa27.08■■□□□ 1.93
HLA-C-208ENST00000487245 KCNE1P15382 129 aa27.08■■□□□ 1.93
HLA-C-208ENST00000487245 GNL1P36915 607 aaPredicted RBP27.08■■□□□ 1.93
HLA-C-208ENST00000487245 XKR4Q5GH76 650 aa27.08■■□□□ 1.93
HLA-C-208ENST00000487245 TAB3Q8N5C8 712 aaPredicted RBP27.08■■□□□ 1.93
HLA-C-208ENST00000487245 CENPIQ92674 756 aaPredicted RBP27.08■■□□□ 1.93
HLA-C-208ENST00000487245 ANKRD27Q96NW4 1050 aa27.08■■□□□ 1.93
HLA-C-208ENST00000487245 TUBB6Q9BUF5 446 aa27.08■■□□□ 1.93
HLA-C-208ENST00000487245 NXF3Q9H4D5 531 aaKnown RBP27.08■■□□□ 1.93
HLA-C-208ENST00000487245 KANSL3Q9P2N6 904 aa27.08■■□□□ 1.93
HLA-C-208ENST00000487245 ZFP69BQ9UJL9 534 aa27.08■■□□□ 1.93
HLA-C-208ENST00000487245 HES2Q9Y543 173 aa27.08■■□□□ 1.93
HLA-C-208ENST00000487245 TRDMT1O14717 391 aaKnown RBP27.08■■□□□ 1.93
HLA-C-208ENST00000487245 YWHAZP63104 245 aaKnown RBP27.08■■□□□ 1.93
HLA-C-208ENST00000487245 KBTBD12Q3ZCT8 623 aa27.08■■□□□ 1.93
HLA-C-208ENST00000487245 PCDH19Q8TAB3 1148 aa27.08■■□□□ 1.93
HLA-C-208ENST00000487245 HSFY1Q96LI6 401 aa27.08■■□□□ 1.93
HLA-C-208ENST00000487245 NPHS2Q9NP85 383 aa27.08■■□□□ 1.93
HLA-C-208ENST00000487245 TTLL3Q9Y4R7 772 aa27.08■■□□□ 1.93
HLA-C-208ENST00000487245 SMIM28A0A1B0GU29 152 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 DCAF8L1A6NGE4 600 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 KPNA7A9QM74 516 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 KCNN4O15554 427 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 GABBR2O75899 941 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 ZBED1O96006 694 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 PSEN2P49810 448 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 HDAC4P56524 1084 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 ADAM17P78536 824 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 FAAP100Q0VG06 881 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 SLC26A11Q86WA9 606 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 CDKL3Q8IVW4 592 aaPredicted RBP27.07■■□□□ 1.92
HLA-C-208ENST00000487245 C7orf31Q8N865 590 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 C2orf69Q8N8R5 385 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 MCUQ8NE86 351 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 LRRC39Q96DD0 335 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 RSRC1Q96IZ7 334 aaKnown RBP27.07■■□□□ 1.92
HLA-C-208ENST00000487245 SERAC1Q96JX3 654 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 TRIM55Q9BYV6 548 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 GPATCH2LQ9NWQ4 482 aa27.07■■□□□ 1.92
HLA-C-208ENST00000487245 PDCD11Q14690 1871 aaKnown RBP27.06■■□□□ 1.92
HLA-C-208ENST00000487245 KLF11O14901 512 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 DNAJC6O75061 913 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 PTPN4P29074 926 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 YWHAGP61981 247 aaKnown RBP eCLIP27.06■■□□□ 1.92
HLA-C-208ENST00000487245 MAP2K5Q13163 448 aa27.06■■□□□ 1.92
HLA-C-208ENST00000487245 SNX17Q15036 470 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms