RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 ISM2Q6H9L7 571 aa25.83■■□□□ 1.73
LIME1-206ENST00000487026 PGBD3Q8N328 593 aa25.83■■□□□ 1.73
LIME1-206ENST00000487026 TERB1Q8NA31 727 aa25.83■■□□□ 1.73
LIME1-206ENST00000487026 OLIG1Q8TAK6 271 aa25.83■■□□□ 1.73
LIME1-206ENST00000487026 BHMTQ93088 406 aa25.83■■□□□ 1.73
LIME1-206ENST00000487026 MYO18AQ92614 2054 aaKnown RBP25.83■■□□□ 1.72
LIME1-206ENST00000487026 TCRBV21S2A2A0A5A6 115 aa25.82■■□□□ 1.72
LIME1-206ENST00000487026 TYRP14679 529 aa25.82■■□□□ 1.72
LIME1-206ENST00000487026 LIMK1P53667 647 aa25.82■■□□□ 1.72
LIME1-206ENST00000487026 FKBP3Q00688 224 aaKnown RBP25.82■■□□□ 1.72
LIME1-206ENST00000487026 COBLL1Q53SF7 1204 aa25.82■■□□□ 1.72
LIME1-206ENST00000487026 GRAMD4Q6IC98 578 aa25.82■■□□□ 1.72
LIME1-206ENST00000487026 KLHDC10Q6PID8 442 aa25.82■■□□□ 1.72
LIME1-206ENST00000487026 SMARCE1Q969G3 411 aa25.82■■□□□ 1.72
LIME1-206ENST00000487026 ERLEC1Q96DZ1 483 aa25.82■■□□□ 1.72
LIME1-206ENST00000487026 SLC16A3O15427 465 aaKnown RBP25.81■■□□□ 1.72
LIME1-206ENST00000487026 RALAP11233 206 aa25.81■■□□□ 1.72
LIME1-206ENST00000487026 DHPSP49366 369 aaPredicted RBP25.81■■□□□ 1.72
LIME1-206ENST00000487026 PSEN1P49768 467 aa25.81■■□□□ 1.72
LIME1-206ENST00000487026 PREPLQ4J6C6 727 aaPredicted RBP25.81■■□□□ 1.72
LIME1-206ENST00000487026 TOGARAM2Q6ZUX3 1019 aa25.81■■□□□ 1.72
LIME1-206ENST00000487026 PIGZQ86VD9 579 aa25.81■■□□□ 1.72
LIME1-206ENST00000487026 C11orf74Q86VG3 221 aa25.81■■□□□ 1.72
LIME1-206ENST00000487026 ZC3H3Q8IXZ2 948 aaKnown RBP25.81■■□□□ 1.72
LIME1-206ENST00000487026 TTC39CQ8N584 583 aa25.81■■□□□ 1.72
LIME1-206ENST00000487026 SPATA20Q8TB22 786 aa25.81■■□□□ 1.72
LIME1-206ENST00000487026 P2RY11Q96G91 374 aa25.81■■□□□ 1.72
LIME1-206ENST00000487026 FAXDC2Q96IV6 333 aa25.81■■□□□ 1.72
LIME1-206ENST00000487026 XPO6Q96QU8 1125 aaKnown RBP25.81■■□□□ 1.72
LIME1-206ENST00000487026 PLK2Q9NYY3 685 aa25.81■■□□□ 1.72
LIME1-206ENST00000487026 WDR35Q9P2L0 1181 aa25.81■■□□□ 1.72
LIME1-206ENST00000487026 THADAQ6YHU6 1953 aa25.81■■□□□ 1.72
LIME1-206ENST00000487026 LAMA1P25391 3075 aa25.81■■□□□ 1.72
LIME1-206ENST00000487026 TM4SF5O14894 197 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 STC2O76061 302 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 KLKB1P03952 638 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 HMBSP08397 361 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 P2RY2P41231 377 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 NUCB2P80303 420 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 EFEMP1Q12805 493 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 LRMPQ12912 555 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 EGFLAMQ63HQ2 1017 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 ARHGAP17Q68EM7 881 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 Q6ZNB5 142 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 NUDT18Q6ZVK8 323 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 ACOX2Q99424 681 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 CLIC5Q9NZA1 410 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 MARK1Q9P0L2 795 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 MBD1Q9UIS9 605 aaPredicted RBP25.8■■□□□ 1.72
LIME1-206ENST00000487026 RASAL2Q9UJF2 1139 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 COQ4Q9Y3A0 265 aa25.8■■□□□ 1.72
LIME1-206ENST00000487026 PRRT4C9JH25 899 aa25.79■■□□□ 1.72
LIME1-206ENST00000487026 TULP2O00295 520 aa25.79■■□□□ 1.72
LIME1-206ENST00000487026 MAP3K13O43283 966 aa25.79■■□□□ 1.72
LIME1-206ENST00000487026 CACNG3O60359 315 aa25.79■■□□□ 1.72
LIME1-206ENST00000487026 ADRB1P08588 477 aa25.79■■□□□ 1.72
LIME1-206ENST00000487026 CUL2Q13617 745 aa25.79■■□□□ 1.72
LIME1-206ENST00000487026 RNF43Q68DV7 783 aa25.79■■□□□ 1.72
LIME1-206ENST00000487026 TADA2BQ86TJ2 420 aa25.79■■□□□ 1.72
LIME1-206ENST00000487026 ZNF276Q8N554 614 aa25.79■■□□□ 1.72
LIME1-206ENST00000487026 ANKRD52Q8NB46 1076 aa25.79■■□□□ 1.72
LIME1-206ENST00000487026 KCNV2Q8TDN2 545 aa25.79■■□□□ 1.72
LIME1-206ENST00000487026 NDRG1Q92597 394 aaKnown RBP25.79■■□□□ 1.72
LIME1-206ENST00000487026 CNTNAP3BQ96NU0 1288 aa25.79■■□□□ 1.72
LIME1-206ENST00000487026 CNTNAP3Q9BZ76 1288 aa25.79■■□□□ 1.72
LIME1-206ENST00000487026 UBXN6Q9BZV1 441 aa25.79■■□□□ 1.72
LIME1-206ENST00000487026 ARMCX3Q9UH62 379 aaPredicted RBP25.79■■□□□ 1.72
LIME1-206ENST00000487026 CNOT1A5YKK6 2376 aaKnown RBP25.78■■□□□ 1.72
LIME1-206ENST00000487026 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.78■■□□□ 1.72
LIME1-206ENST00000487026 PATE3B3GLJ2 98 aa25.78■■□□□ 1.72
LIME1-206ENST00000487026 NTSR1P30989 418 aa25.78■■□□□ 1.72
LIME1-206ENST00000487026 GOLGA7BQ2TAP0 167 aa25.78■■□□□ 1.72
LIME1-206ENST00000487026 MAP7D1Q3KQU3 841 aa25.78■■□□□ 1.72
LIME1-206ENST00000487026 RAB41Q5JT25 222 aa25.78■■□□□ 1.72
LIME1-206ENST00000487026 ARMCX6Q7L4S7 300 aa25.78■■□□□ 1.72
LIME1-206ENST00000487026 CYP2U1Q7Z449 544 aa25.78■■□□□ 1.72
LIME1-206ENST00000487026 TRMT11Q7Z4G4 463 aaKnown RBP25.78■■□□□ 1.72
LIME1-206ENST00000487026 TMEFF1Q8IYR6 380 aa25.78■■□□□ 1.72
LIME1-206ENST00000487026 SLC35C1Q96A29 364 aa25.78■■□□□ 1.72
LIME1-206ENST00000487026 TIGD1Q96MW7 591 aa25.78■■□□□ 1.72
LIME1-206ENST00000487026 STARD13Q9Y3M8 1113 aa25.78■■□□□ 1.72
LIME1-206ENST00000487026 CISD3P0C7P0 127 aa25.77■■□□□ 1.72
LIME1-206ENST00000487026 HOXB2P14652 356 aa25.77■■□□□ 1.72
LIME1-206ENST00000487026 CD44P16070 742 aaKnown RBP25.77■■□□□ 1.72
LIME1-206ENST00000487026 TKTL1P51854 596 aa25.77■■□□□ 1.72
LIME1-206ENST00000487026 LRRC63Q05C16 580 aa25.77■■□□□ 1.72
LIME1-206ENST00000487026 PIGKQ92643 395 aa25.77■■□□□ 1.72
LIME1-206ENST00000487026 SPACA7Q96KW9 195 aa25.77■■□□□ 1.72
LIME1-206ENST00000487026 EDEM2Q9BV94 578 aa25.77■■□□□ 1.72
LIME1-206ENST00000487026 TSPAN16Q9UKR8 245 aa25.77■■□□□ 1.72
LIME1-206ENST00000487026 CD19P15391 556 aa25.76■■□□□ 1.71
LIME1-206ENST00000487026 GABRG2P18507 467 aa25.76■■□□□ 1.71
LIME1-206ENST00000487026 DGKGP49619 791 aa25.76■■□□□ 1.71
LIME1-206ENST00000487026 YWHAGP61981 247 aaKnown RBP eCLIP25.76■■□□□ 1.71
LIME1-206ENST00000487026 COG7P83436 770 aa25.76■■□□□ 1.71
LIME1-206ENST00000487026 PDE4CQ08493 712 aa25.76■■□□□ 1.71
LIME1-206ENST00000487026 LPCAT2Q7L5N7 544 aa25.76■■□□□ 1.71
LIME1-206ENST00000487026 CHPFQ8IZ52 775 aa25.76■■□□□ 1.71
LIME1-206ENST00000487026 UBA3Q8TBC4 463 aa25.76■■□□□ 1.71
LIME1-206ENST00000487026 DDX1Q92499 740 aaKnown RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms