RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 METTL18O95568 372 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 SNAI1O95863 264 aaPredicted RBP12.79□□□□□ -0.36
PTCD2-204ENST00000486995 BGNP21810 368 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 MAGEA3P43357 314 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 GBE1Q04446 702 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 DPYSL2Q16555 572 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 SOWAHAQ2M3V2 549 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 ARHGAP17Q68EM7 881 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 ZNF534Q76KX8 674 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 ZDHHC17Q8IUH5 632 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 FAM13CQ8NE31 585 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 MCUQ8NE86 351 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 OR6B3Q8NGW1 331 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 CENPIQ92674 756 aaPredicted RBP12.79□□□□□ -0.36
PTCD2-204ENST00000486995 SNX27Q96L92 541 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 EIF2AQ9BY44 585 aaKnown RBP12.79□□□□□ -0.36
PTCD2-204ENST00000486995 ADAMTS10Q9H324 1103 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 SAR1AQ9NR31 198 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 RNF19AQ9NV58 838 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 MTMR10Q9NXD2 777 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 GJD2Q9UKL4 321 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 PLXNA1Q9UIW2 1896 aa12.79□□□□□ -0.36
PTCD2-204ENST00000486995 TGDSO95455 350 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 RPSAP08865 295 aaKnown RBP12.78□□□□□ -0.36
PTCD2-204ENST00000486995 SNRPAP09012 282 aaKnown RBP12.78□□□□□ -0.36
PTCD2-204ENST00000486995 PTPN9P43378 593 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 SERPINB4P48594 390 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 RASSF2P50749 326 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 TMEM62Q0P6H9 643 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 LONP2Q86WA8 852 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 UNC93AQ86WB7 457 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 SIGLEC10Q96LC7 697 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 SRPK1Q96SB4 655 aaKnown RBP12.78□□□□□ -0.36
PTCD2-204ENST00000486995 MYCBPQ99417 103 aaPredicted RBP12.78□□□□□ -0.36
PTCD2-204ENST00000486995 LNPEPQ9UIQ6 1025 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 GINS2Q9Y248 185 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 HES2Q9Y543 173 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 CITO14578 2027 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 COPEO14579 308 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 UGT1A9O60656 530 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 GCATO75600 419 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 APOEP02649 317 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 DLDP09622 509 aaKnown RBP12.78□□□□□ -0.36
PTCD2-204ENST00000486995 EPHB2P29323 1055 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 ELF1P32519 619 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 SNAPC2Q13487 334 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 GLRA4Q5JXX5 417 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 ALKAL1Q6UXT8 129 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 UNC5AQ6ZN44 842 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 LRRC52Q8N7C0 313 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 C7orf31Q8N865 590 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 LRRC39Q96DD0 335 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 TRIM56Q9BRZ2 755 aaKnown RBP12.78□□□□□ -0.36
PTCD2-204ENST00000486995 DHX35Q9H5Z1 703 aaKnown RBP12.78□□□□□ -0.36
PTCD2-204ENST00000486995 UGT1A7Q9HAW7 530 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 UGT1A10Q9HAW8 530 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 UGT1A8Q9HAW9 530 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 CDHR5Q9HBB8 845 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 SETD4Q9NVD3 440 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 HEY2Q9UBP5 337 aa12.78□□□□□ -0.36
PTCD2-204ENST00000486995 A8MXQ7 604 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 DIAPH2O60879 1101 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 RFPL1O75677 317 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 KRT37O76014 449 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 IL1BP01584 269 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 SMPD1P17405 629 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 PTPN4P29074 926 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 ARFIP2P53365 341 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 SNX16P57768 344 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 C9orf57Q5W0N0 161 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 SLC27A1Q6PCB7 646 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 SLC26A9Q7LBE3 791 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 CDKL3Q8IVW4 592 aaPredicted RBP12.77□□□□□ -0.36
PTCD2-204ENST00000486995 MPP5Q8N3R9 675 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 CCDC33Q8N5R6 958 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 GPATCH11Q8N954 259 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 N4BP2L2Q92802 583 aaPredicted RBP12.77□□□□□ -0.36
PTCD2-204ENST00000486995 TLE6Q9H808 572 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 NKX1-2Q9UD57 310 aaPredicted RBP12.77□□□□□ -0.36
PTCD2-204ENST00000486995 GTF2IRD1Q9UHL9 959 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 PLLPQ9Y342 182 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 SBF1O95248 1867 aa12.77□□□□□ -0.36
PTCD2-204ENST00000486995 KLF11O14901 512 aa12.77□□□□□ -0.37
PTCD2-204ENST00000486995 MMP3P08254 477 aa12.77□□□□□ -0.37
PTCD2-204ENST00000486995 PDGFRBP09619 1106 aa12.77□□□□□ -0.37
PTCD2-204ENST00000486995 HOXD8P13378 290 aaPredicted RBP12.77□□□□□ -0.37
PTCD2-204ENST00000486995 CCDC130P13994 396 aa12.77□□□□□ -0.37
PTCD2-204ENST00000486995 DESP17661 470 aa12.77□□□□□ -0.37
PTCD2-204ENST00000486995 GM2AP17900 193 aa12.77□□□□□ -0.37
PTCD2-204ENST00000486995 RPL34P49207 117 aaKnown RBP12.77□□□□□ -0.37
PTCD2-204ENST00000486995 MRPS5P82675 430 aaKnown RBP12.77□□□□□ -0.37
PTCD2-204ENST00000486995 TRMT10BQ6PF06 316 aaKnown RBP12.77□□□□□ -0.37
PTCD2-204ENST00000486995 KCNT2Q6UVM3 1135 aa12.77□□□□□ -0.37
PTCD2-204ENST00000486995 C4orf22Q6V702 233 aa12.77□□□□□ -0.37
PTCD2-204ENST00000486995 VPS52Q8N1B4 723 aa12.77□□□□□ -0.37
PTCD2-204ENST00000486995 ANKRD52Q8NB46 1076 aa12.77□□□□□ -0.37
PTCD2-204ENST00000486995 BEST2Q8NFU1 509 aa12.77□□□□□ -0.37
PTCD2-204ENST00000486995 KBTBD7Q8WVZ9 684 aa12.77□□□□□ -0.37
PTCD2-204ENST00000486995 KCTD15Q96SI1 283 aaPredicted RBP12.77□□□□□ -0.37
PTCD2-204ENST00000486995 TMEM120AQ9BXJ8 343 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms