RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 LLGL1Q15334 1064 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 UAP1Q16222 522 aaPredicted RBP12.1□□□□□ -0.47
PRKCB-207ENST00000486868 CCDC142Q17RM4 750 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 TRIM60Q495X7 471 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 PAN2Q504Q3 1202 aaKnown RBP12.1□□□□□ -0.47
PRKCB-207ENST00000486868 VARS2Q5ST30 1063 aaKnown RBP12.1□□□□□ -0.47
PRKCB-207ENST00000486868 OTUD1Q5VV17 481 aaPredicted RBP12.1□□□□□ -0.47
PRKCB-207ENST00000486868 HIBCHQ6NVY1 386 aaPredicted RBP12.1□□□□□ -0.47
PRKCB-207ENST00000486868 ANKS3Q6ZW76 656 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 GSTA5Q7RTV2 222 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 HOOK3Q86VS8 718 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 ARHGAP18Q8N392 663 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 PQLC3Q8N755 202 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 PCDH19Q8TAB3 1148 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 P3H4Q92791 437 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 ACSF2Q96CM8 615 aaPredicted RBP12.1□□□□□ -0.47
PRKCB-207ENST00000486868 GDAP1L1Q96MZ0 367 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 ZIM3Q96PE6 472 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 KCNK16Q96T55 309 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 FBXO44Q9H4M3 255 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 TMEM30AQ9NV96 361 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 TMLHEQ9NVH6 421 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 MARCH5Q9NX47 278 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 ANAPC5Q9UJX4 755 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 SHOC2Q9UQ13 582 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 PCDHB5Q9Y5E4 795 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 NFS1Q9Y697 457 aa12.1□□□□□ -0.47
PRKCB-207ENST00000486868 COL4A4P53420 1690 aaPredicted RBP12.1□□□□□ -0.47
PRKCB-207ENST00000486868 FAM92AA1XBS5 289 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 YJEFN3A6XGL0 299 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 E7ENQ6 273 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 H3BRJ5 948 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 M0QYT0 321 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 EIF3HO15372 352 aaKnown RBP eCLIP12.09□□□□□ -0.47
PRKCB-207ENST00000486868 IGLV3-25P01717 112 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 CLTBP09497 229 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 RBP3P10745 1247 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 CYP2F1P24903 491 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 ADRA1BP35368 520 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 SLC11A1P49279 550 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 CXCR3P49682 368 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 ITGA8P53708 1063 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 CACNA2D1P54289 1103 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 BCAR1P56945 870 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 DEUP1Q05D60 604 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 GPR17Q13304 367 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 EIF4EBP2Q13542 120 aaPredicted RBP12.09□□□□□ -0.47
PRKCB-207ENST00000486868 ARL13BQ3SXY8 428 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 EMC10Q5UCC4 262 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 FUT10Q6P4F1 479 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 GPRIN1Q7Z2K8 1008 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 GPR65Q8IYL9 337 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 ZCCHC9Q8N567 271 aaKnown RBP12.09□□□□□ -0.47
PRKCB-207ENST00000486868 SPPL2BQ8TCT7 592 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 HASPINQ8TF76 798 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 RSAD2Q8WXG1 361 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 CSPG4P5Q96PW8 444 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 ADAM33Q9BZ11 813 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 FRMD8Q9BZ67 464 aaPredicted RBP12.09□□□□□ -0.47
PRKCB-207ENST00000486868 WDR6Q9NNW5 1121 aaKnown RBP12.09□□□□□ -0.47
PRKCB-207ENST00000486868 ABCC13Q9NSE7 274 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 HSFX1Q9UBD0 423 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 DNAJB4Q9UDY4 337 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 FBXW11Q9UKB1 542 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 TPX2Q9ULW0 747 aaKnown RBP12.09□□□□□ -0.47
PRKCB-207ENST00000486868 SCML2Q9UQR0 700 aa12.09□□□□□ -0.47
PRKCB-207ENST00000486868 PRG3Q9Y2Y8 225 aaPredicted RBP12.09□□□□□ -0.47
PRKCB-207ENST00000486868 TTC3P53804 2025 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 A6NNZ2 444 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 TBKBP1A7MCY6 615 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 KIAA0355O15063 1070 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 DGKIO75912 1065 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 USP17L7P0C7H9 530 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 TFE3P19532 575 aaPredicted RBP12.08□□□□□ -0.48
PRKCB-207ENST00000486868 IBSPP21815 317 aaPredicted RBP12.08□□□□□ -0.48
PRKCB-207ENST00000486868 GRIK1P39086 918 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 ATN1P54259 1190 aaPredicted RBP12.08□□□□□ -0.48
PRKCB-207ENST00000486868 CBX1P83916 185 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 ROR1Q01973 937 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 MMRN1Q13201 1228 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 SEMA3BQ13214 749 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 CA9Q16790 459 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 TCTN1Q2MV58 587 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 TUBB8Q3ZCM7 444 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 CTXN3Q4LDR2 81 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 RAB6CQ53S08 254 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 ZC3H12AQ5D1E8 599 aaKnown RBP12.08□□□□□ -0.48
PRKCB-207ENST00000486868 EFHC2Q5JST6 749 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 BRMS1LQ5PSV4 323 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 ACBD5Q5T8D3 534 aaPredicted RBP12.08□□□□□ -0.48
PRKCB-207ENST00000486868 AGBL2Q5U5Z8 902 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 FAM171A1Q5VUB5 890 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 SYPL2Q5VXT5 272 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 IZUMO3Q5VZ72 239 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 BSPRYQ5W0U4 402 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 HFE2Q6ZVN8 426 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 PDZD4Q76G19 769 aaPredicted RBP12.08□□□□□ -0.48
PRKCB-207ENST00000486868 MON1AQ86VX9 555 aa12.08□□□□□ -0.48
PRKCB-207ENST00000486868 CDKL3Q8IVW4 592 aaPredicted RBP12.08□□□□□ -0.48
PRKCB-207ENST00000486868 RNF168Q8IYW5 571 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms