RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TCEAL4Q96EI5 215 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 RIPOR3Q96MK2 946 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 SELENOOQ9BVL4 669 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 NUP85Q9BW27 656 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 TRIM7Q9C029 511 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 ADAM7Q9H2U9 754 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 PIDD1Q9HB75 910 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 PARVAQ9NVD7 372 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 ASNSD1Q9NWL6 643 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 EHD2Q9NZN4 543 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 TRPM5Q9NZQ8 1165 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 NAALADL1Q9UQQ1 740 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 SPTBN4Q9H254 2564 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 PATJQ8NI35 1801 aa13.38□□□□□ -0.27
HDAC6-229ENST00000486665 WDR87Q6ZQQ6 2873 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 TMEM191CA6NGB0 347 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 H0Y858 1186 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 LTFP02788 710 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 GLI1P08151 1106 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 CCDC175P0C221 793 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 SRGAP2BP0DMP2 458 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 HOXB8P17481 243 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-229ENST00000486665 FLT3P36888 993 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 SCNN1AP37088 669 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 YWHAZP63104 245 aaKnown RBP13.37□□□□□ -0.27
HDAC6-229ENST00000486665 OGDHQ02218 1023 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 TCEAL1Q15170 157 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 SLC5A9Q2M3M2 681 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 HS1BP3Q53T59 392 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 PRSS36Q5K4E3 855 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 SNX30Q5VWJ9 437 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 SYPL2Q5VXT5 272 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 POTEHQ6S545 545 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 REXO1L1PQ8IX06 675 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 DEFB106AQ8N104 65 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 TMEM105Q8N8V8 129 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 SHKBP1Q8TBC3 707 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 RXFP2Q8WXD0 754 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 OVCA2Q8WZ82 227 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 FAM149B1Q96BN6 582 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 BTBD6Q96KE9 485 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 SLITRK1Q96PX8 696 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 SLC2A13Q96QE2 648 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 OSGEPQ9NPF4 335 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 LUC7LQ9NQ29 371 aaKnown RBP13.37□□□□□ -0.27
HDAC6-229ENST00000486665 ASAH2Q9NR71 780 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 TLR8Q9NR97 1041 aaKnown RBP13.37□□□□□ -0.27
HDAC6-229ENST00000486665 TRMT1Q9NXH9 659 aaKnown RBP13.37□□□□□ -0.27
HDAC6-229ENST00000486665 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.37□□□□□ -0.27
HDAC6-229ENST00000486665 CTTNBP2NLQ9P2B4 639 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 UXTQ9UBK9 157 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-229ENST00000486665 NUDT5Q9UKK9 219 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 GREB1Q4ZG55 1949 aa13.37□□□□□ -0.27
HDAC6-229ENST00000486665 A0A1W2PRU2 124 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 C2CD4BA6NLJ0 364 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 SART1O43290 800 aaKnown RBP13.36□□□□□ -0.27
HDAC6-229ENST00000486665 HSF2BPO75031 334 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 TBX18O95935 607 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 RARGP13631 454 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 PITX1P78337 314 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-229ENST00000486665 CYP4F8P98187 520 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 PABPC1LQ4VXU2 614 aaKnown RBP13.36□□□□□ -0.27
HDAC6-229ENST00000486665 BTBD8Q5XKL5 378 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 DCUN1D2Q6PH85 259 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 PDZD4Q76G19 769 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-229ENST00000486665 ARHGAP18Q8N392 663 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 C17orf53Q8N3J3 647 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-229ENST00000486665 PDZD8Q8NEN9 1154 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 ITFG1Q8TB96 612 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 MCEEQ96PE7 176 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 DDX23Q9BUQ8 820 aaKnown RBP13.36□□□□□ -0.27
HDAC6-229ENST00000486665 ADAM33Q9BZ11 813 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 ATXN3LQ9H3M9 355 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 CCSER2Q9H7U1 834 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 POPDC2Q9HBU9 364 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 MRPL47Q9HD33 250 aaKnown RBP13.36□□□□□ -0.27
HDAC6-229ENST00000486665 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.36□□□□□ -0.27
HDAC6-229ENST00000486665 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.36□□□□□ -0.27
HDAC6-229ENST00000486665 PAXBP1Q9Y5B6 917 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 SCINQ9Y6U3 715 aa13.36□□□□□ -0.27
HDAC6-229ENST00000486665 A0A0A6YYK5 440 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-229ENST00000486665 C2orf78A6NCI8 922 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 USP27XA6NNY8 438 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 BTNL10A8MVZ5 291 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 MDM4O15151 490 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 GFRA3O60609 400 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 DAB1O75553 588 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 MTA2O94776 668 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 NCAM1P13591 858 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 PDGFRAP16234 1089 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 TFE3P19532 575 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-229ENST00000486665 NOP2P46087 812 aaKnown RBP13.35□□□□□ -0.27
HDAC6-229ENST00000486665 PPP3CCP48454 512 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 ZNF252P-AS1Q0IIN9 211 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 KIF5AQ12840 1032 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 TEAD2Q15562 447 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 CCDC14Q49A88 953 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 RAB6CQ53S08 254 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 DCAF6Q58WW2 860 aa13.35□□□□□ -0.27
HDAC6-229ENST00000486665 STXBP5Q5T5C0 1151 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms