RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 FAM46DQ8NEK8 389 aa4.51□□□□□ -1.69
VPS8-223ENST00000485024 OR56A3Q8NH54 315 aa4.51□□□□□ -1.69
VPS8-223ENST00000485024 USP13Q92995 863 aaPredicted RBP4.51□□□□□ -1.69
VPS8-223ENST00000485024 NACC2Q96BF6 587 aa4.51□□□□□ -1.69
VPS8-223ENST00000485024 PNKPQ96T60 521 aa4.51□□□□□ -1.69
VPS8-223ENST00000485024 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS8-223ENST00000485024 MAGEH1Q9H213 219 aa4.51□□□□□ -1.69
VPS8-223ENST00000485024 PRDM16Q9HAZ2 1276 aa4.51□□□□□ -1.69
VPS8-223ENST00000485024 ZBTB26Q9HCK0 441 aa4.51□□□□□ -1.69
VPS8-223ENST00000485024 OBP2BQ9NPH6 170 aa4.51□□□□□ -1.69
VPS8-223ENST00000485024 FBXO34Q9NWN3 711 aa4.51□□□□□ -1.69
VPS8-223ENST00000485024 C9orf78Q9NZ63 289 aaPredicted RBP4.51□□□□□ -1.69
VPS8-223ENST00000485024 RGL1Q9NZL6 768 aa4.51□□□□□ -1.69
VPS8-223ENST00000485024 TMOD4Q9NZQ9 345 aa4.51□□□□□ -1.69
VPS8-223ENST00000485024 HESX1Q9UBX0 185 aa4.51□□□□□ -1.69
VPS8-223ENST00000485024 PNMA2Q9UL42 364 aa4.51□□□□□ -1.69
VPS8-223ENST00000485024 PCDHGB3Q9Y5G1 929 aa4.51□□□□□ -1.69
VPS8-223ENST00000485024 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS8-223ENST00000485024 TRAPPC8Q9Y2L5 1435 aa4.51□□□□□ -1.69
VPS8-223ENST00000485024 WDR7Q9Y4E6 1490 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 PNPLA7Q6ZV29 1317 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 NWD1Q149M9 1564 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 LINC01548A6NM66 108 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 LGALS16A8MUM7 142 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 E7ENX8 843 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 POLRMTO00411 1230 aaKnown RBP4.5□□□□□ -1.69
VPS8-223ENST00000485024 ACKR2O00590 384 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 A1BGP04217 495 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 ITGA5P08648 1049 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 EGR1P18146 543 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 GCSHP23434 173 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 SLC6A4P31645 630 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 ZNF134P52741 427 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 ITGA8P53708 1063 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 CXADRP78310 365 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 TAP2Q03519 686 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 SLC10A2Q12908 348 aaPredicted RBP4.5□□□□□ -1.69
VPS8-223ENST00000485024 EFR3AQ14156 821 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 MAPKAPK3Q16644 382 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 TRIM71Q2Q1W2 868 aaKnown RBP4.5□□□□□ -1.69
VPS8-223ENST00000485024 PLA1AQ53H76 456 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 TSTD2Q5T7W7 516 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 ANKRD45Q5TZF3 282 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 JAKMIP3Q5VZ66 844 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 TANGO2Q6ICL3 276 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 FOXR2Q6PJQ5 311 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 CYP26C1Q6V0L0 522 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 MED25Q71SY5 747 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 PPP1R32Q7Z5V6 425 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 TTC30AQ86WT1 665 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 NAXEQ8NCW5 288 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 TMIEQ8NEW7 156 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 RSC1A1Q92681 617 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 KLHL32Q96NJ5 620 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 SENP7Q9BQF6 1050 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 FAM167BQ9BTA0 163 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 EBF3Q9H4W6 596 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 SAYSD1Q9NPB0 183 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 HELLSQ9NRZ9 838 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 HERC5Q9UII4 1024 aaKnown RBP4.5□□□□□ -1.69
VPS8-223ENST00000485024 ADAM21Q9UKJ8 722 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 GPR52Q9Y2T5 361 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 CAMSAP1Q5T5Y3 1602 aa4.5□□□□□ -1.69
VPS8-223ENST00000485024 POLA1P09884 1462 aaPredicted RBP4.49□□□□□ -1.69
VPS8-223ENST00000485024 RAD54L2Q9Y4B4 1467 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 AFF2P51816 1311 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 RTEL1-TNFRSF6BF6WH68 1400 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 CCDC78A2IDD5 438 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 M0R3H8 397 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 RAB27BO00194 218 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 CCNT2O60583 730 aaKnown RBP4.49□□□□□ -1.69
VPS8-223ENST00000485024 KIF20AO95235 890 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 GABRB3P28472 473 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 SLC5A2P31639 672 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 CASP2P42575 452 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 LOXL3P58215 753 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 KRT17Q04695 432 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 NSUN2Q08J23 767 aaKnown RBP eCLIP4.49□□□□□ -1.69
VPS8-223ENST00000485024 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.49□□□□□ -1.69
VPS8-223ENST00000485024 FAXCQ5TGI0 409 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 SFRP4Q6FHJ7 346 aaPredicted RBP4.49□□□□□ -1.69
VPS8-223ENST00000485024 KIAA1161Q6NSJ0 714 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 KLHL17Q6TDP4 642 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 CCDC117Q8IWD4 279 aaPredicted RBP4.49□□□□□ -1.69
VPS8-223ENST00000485024 IL17REQ8NFR9 667 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 SEMA6DQ8NFY4 1073 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 DENND1AQ8TEH3 1009 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 RAPGEF4Q8WZA2 1011 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 RUBCNQ92622 972 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 PTCD3Q96EY7 689 aaKnown RBP4.49□□□□□ -1.69
VPS8-223ENST00000485024 PHACTR3Q96KR7 559 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 TRIB1Q96RU8 372 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 PRPF18Q99633 342 aaKnown RBP4.49□□□□□ -1.69
VPS8-223ENST00000485024 GDF15Q99988 308 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 MESP1Q9BRJ9 268 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 UNC45AQ9H3U1 944 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 RNPEPQ9H4A4 650 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 GALNT9Q9HCQ5 603 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 ELOVL5Q9NYP7 299 aa4.49□□□□□ -1.69
VPS8-223ENST00000485024 PDP2Q9P2J9 529 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms