RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 HTR3DQ70Z44 454 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 TADA2BQ86TJ2 420 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 ARHGAP18Q8N392 663 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 KIAA1958Q8N8K9 716 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 BHMTQ93088 406 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 OTUB2Q96DC9 234 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 HHIPQ96QV1 700 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 HINFPQ9BQA5 517 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 TUBGCP2Q9BSJ2 902 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 SIX2Q9NPC8 291 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 ZDHHC4Q9NPG8 344 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 SPHK2Q9NRA0 654 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 APEX2Q9UBZ4 518 aa12.88□□□□□ -0.35
MSH5-216ENST00000484309 SLC12A8A0AV02 714 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 BECN2A8MW95 431 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 NEDD8-MDP1E9PL57 170 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 K7EQS6 105 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 TRIM24O15164 1050 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 THAP12O43422 761 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 LILRB5O75023 590 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 PNMA6AP0CW24 399 aaPredicted RBP12.87□□□□□ -0.35
MSH5-216ENST00000484309 GNA15P30679 374 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 DAOAP59103 153 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 STILQ15468 1287 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 VWA3BQ502W6 1294 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 MIIPQ5JXC2 388 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 PM20D1Q6GTS8 502 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 KLHDC10Q6PID8 442 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 RBM43Q6ZSC3 357 aaKnown RBP12.87□□□□□ -0.35
MSH5-216ENST00000484309 CCDC33Q8N5R6 958 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 SUMF1Q8NBK3 374 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 SLC35F5Q8WV83 523 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 KCTD13Q8WZ19 329 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 CDK5RAP1Q96SZ6 601 aaKnown RBP12.87□□□□□ -0.35
MSH5-216ENST00000484309 PNKPQ96T60 521 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 MIS12Q9H081 205 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 NDST4Q9H3R1 872 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 ARHGEF4Q9NR80 690 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 ST7Q9NRC1 585 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 TAB2Q9NYJ8 693 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 PLK2Q9NYY3 685 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 MARCH2Q9P0N8 246 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 SFMBT1Q9UHJ3 866 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 SLC8A2Q9UPR5 921 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 CNTN6Q9UQ52 1028 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 NFE2L3Q9Y4A8 694 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 THADAQ6YHU6 1953 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 WDR87Q6ZQQ6 2873 aa12.87□□□□□ -0.35
MSH5-216ENST00000484309 CEP192Q8TEP8 1941 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 GTPBP10A4D1E9 387 aaKnown RBP12.86□□□□□ -0.35
MSH5-216ENST00000484309 MSI1O43347 362 aaKnown RBP12.86□□□□□ -0.35
MSH5-216ENST00000484309 ATG13O75143 517 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 TULP3O75386 442 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 KAT7O95251 611 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 PAPSS2O95340 614 aaPredicted RBP12.86□□□□□ -0.35
MSH5-216ENST00000484309 KLKB1P03952 638 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 APODP05090 189 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 CORO1AP31146 461 aaKnown RBP12.86□□□□□ -0.35
MSH5-216ENST00000484309 TIE1P35590 1138 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 NRLP54845 237 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 FBXO43Q4G163 708 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 BSPRYQ5W0U4 402 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 SASS6Q6UVJ0 657 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 Q6ZNB5 142 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 PRR23BQ6ZRT6 265 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 ENOSF1Q7L5Y1 443 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 DENND1CQ8IV53 801 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 FMNL3Q8IVF7 1028 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 ZNF276Q8N554 614 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 DCLK2Q8N568 766 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 USP33Q8TEY7 942 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 RNF139Q8WU17 664 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 ZNF606Q8WXB4 792 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 P2RY11Q96G91 374 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 BBS2Q9BXC9 721 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 FAM126AQ9BYI3 521 aaPredicted RBP12.86□□□□□ -0.35
MSH5-216ENST00000484309 SEMA4AQ9H3S1 761 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 CNGB3Q9NQW8 809 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 DNAJC12Q9UKB3 198 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 STRIP2Q9ULQ0 834 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 SMG5Q9UPR3 1016 aaKnown RBP12.86□□□□□ -0.35
MSH5-216ENST00000484309 ZNF292O60281 2723 aa12.86□□□□□ -0.35
MSH5-216ENST00000484309 FAM170AA1A519 330 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 HOXC11O43248 304 aaPredicted RBP12.85□□□□□ -0.35
MSH5-216ENST00000484309 MBD3O95983 291 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 TYRP14679 529 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 GPD2P43304 727 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 COG7P83436 770 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 DMC1Q14565 340 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 TCP11X2Q5H9J9 407 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 EMC10Q5UCC4 262 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 LONP2Q86WA8 852 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 PASD1Q8IV76 773 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 ETFBKMTQ8IXQ9 262 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 PHTF2Q8N3S3 785 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 ALLCQ8N6M5 410 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 SHC3Q92529 594 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 ACDQ96AP0 544 aa12.85□□□□□ -0.35
MSH5-216ENST00000484309 LSM14BQ9BX40 385 aaKnown RBP12.85□□□□□ -0.35
MSH5-216ENST00000484309 EPC1Q9H2F5 836 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms