RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 HOXD13P35453 343 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 PPP1R2P41236 205 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 VIPR2P41587 438 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 CHRNA4P43681 627 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 GRIA4P48058 902 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 CCR3P51677 355 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 KPNA1P52294 538 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-215ENST00000484203 NLRP12P59046 1061 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 BIRC3Q13489 604 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 CUL4BQ13620 913 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 GRM2Q14416 872 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 PDGFRLQ15198 375 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 NFIL3Q16649 462 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 SPRED3Q2MJR0 410 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 SGSM1Q2NKQ1 1148 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 ITPRIPL2Q3MIP1 535 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.56□□□□□ -1.36
PTCD3-215ENST00000484203 FBXO43Q4G163 708 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 ALG1LQ6GMV1 187 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 VITQ6UXI7 678 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 INTS8Q75QN2 995 aaKnown RBP6.56□□□□□ -1.36
PTCD3-215ENST00000484203 CD163Q86VB7 1156 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 LRRTM3Q86VH5 581 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 DDX42Q86XP3 938 aaKnown RBP eCLIP6.56□□□□□ -1.36
PTCD3-215ENST00000484203 GUF1Q8N442 669 aaKnown RBP6.56□□□□□ -1.36
PTCD3-215ENST00000484203 PDZD8Q8NEN9 1154 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 OR5B17Q8NGF7 314 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 OR6B3Q8NGW1 331 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 MYCBPAPQ8TBZ2 947 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 OVCA2Q8WZ82 227 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 ZSWIM3Q96MP5 696 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 SLITRK1Q96PX8 696 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 TMEM209Q96SK2 561 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 PI4K2AQ9BTU6 479 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 FGFBP2Q9BYJ0 223 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 FOXQ1Q9C009 403 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 BLZF1Q9H2G9 400 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 IKZF4Q9H2S9 585 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 HEBP1Q9NRV9 189 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 TDP1Q9NUW8 608 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 DMAC2Q9NW81 257 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 COMMD8Q9NX08 183 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 ZSCAN32Q9NX65 697 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 TRPM5Q9NZQ8 1165 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 GTF3C4Q9UKN8 822 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 TRAF3IP3Q9Y228 551 aa6.56□□□□□ -1.36
PTCD3-215ENST00000484203 A0A1B0GVL5 298 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 MYBPHLA2RUH7 354 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 PRR23AA6NEV1 266 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 SLC38A8A6NNN8 435 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 A8MXQ7 604 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 ARNTLO00327 626 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 SLC9A3R1O14745 358 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-215ENST00000484203 CLIC2O15247 247 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 FOXD2O60548 495 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-215ENST00000484203 RTN3O95197 1032 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-215ENST00000484203 PAPSS2O95340 614 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-215ENST00000484203 NR3C1P04150 777 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 SP9P0CG40 484 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 TCF3P15923 654 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 HMGA1P17096 107 aaKnown RBP6.55□□□□□ -1.36
PTCD3-215ENST00000484203 GJA1P17302 382 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 PTPN1P18031 435 aaKnown RBP6.55□□□□□ -1.36
PTCD3-215ENST00000484203 SDHBP21912 280 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 CYP2F1P24903 491 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 HOXA6P31267 233 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 GTF2H1P32780 548 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 CNR2P34972 360 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 GRIK1P39086 918 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 ARL4DP49703 201 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 NOP14P78316 857 aaKnown RBP6.55□□□□□ -1.36
PTCD3-215ENST00000484203 FAM160A1Q05DH4 1040 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 GRSF1Q12849 480 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTCD3-215ENST00000484203 STK4Q13043 487 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 PKP1Q13835 747 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 ZNF699Q32M78 642 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 EDRF1Q3B7T1 1238 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 PREPLQ4J6C6 727 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-215ENST00000484203 ZNF667Q5HYK9 610 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 TMCO4Q5TGY1 634 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 TDRD10Q5VZ19 366 aaKnown RBP6.55□□□□□ -1.36
PTCD3-215ENST00000484203 IGF2-ASQ6U949 168 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 DNAJC14Q6Y2X3 702 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-215ENST00000484203 KRBA2Q6ZNG9 492 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 DENND5BQ6ZUT9 1274 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 VN1R5Q7Z5H4 357 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 FRMD5Q7Z6J6 570 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 UNC93AQ86WB7 457 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 SCN4BQ8IWT1 228 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 SPEM1Q8N4L4 309 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 TTC9BQ8N6N2 239 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 GALNT11Q8NCW6 608 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 STKLD1Q8NE28 680 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 GLIS3Q8NEA6 775 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 PARD3BQ8TEW8 1205 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 GIPC2Q8TF65 315 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 KBTBD7Q8WVZ9 684 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 ATP2A3Q93084 1043 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 HPS3Q969F9 1004 aa6.55□□□□□ -1.36
PTCD3-215ENST00000484203 KLHDC7BQ96G42 594 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms