RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 ACTRT2Q8TDY3 377 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 DDI1Q8WTU0 396 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 KLF6Q99612 283 aaPredicted RBP11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 NTPCRQ9BSD7 190 aaKnown RBP11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 HGH1Q9BTY7 390 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 CENPOQ9BU64 300 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 PKD2L1Q9P0L9 805 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 TAGLN3Q9UI15 199 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 ITM2BQ9Y287 266 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 DENND3A2RUS2 1198 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 E5RJQ4 531 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 GARTP22102 1010 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 PPARGP37231 505 aaPredicted RBP11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 CDK9P50750 372 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 EPHB1P54762 984 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 NOMO3P69849 1222 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 SLC25A3Q00325 362 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 HIC1Q14526 733 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 FASTKD3Q14CZ7 662 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 UGCGQ16739 394 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 FAM102BQ5T8I3 360 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 RNASEH2BQ5TBB1 312 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 PRPF39Q86UA1 669 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 GPD1LQ8N335 351 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 GLIS1Q8NBF1 620 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 DDHD1Q8NEL9 900 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 IL31RAQ8NI17 732 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 PI4K2AQ9BTU6 479 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 DNPEPQ9ULA0 475 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 SSX2IPQ9Y2D8 614 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 PIAS1O75925 651 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 DSG3P32926 999 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 TCF7P36402 384 aaPredicted RBP11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 ARSEP51690 589 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 PSMC5P62195 406 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 C1QBPQ07021 282 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 LRRC38Q5VT99 294 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 FAM91A1Q658Y4 838 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 CENPUQ71F23 418 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 CPNE9Q8IYJ1 553 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 GALNT4Q8N4A0 578 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 SLITRK1Q96PX8 696 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 C17orf75Q9HAS0 396 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 COL20A1Q9P218 1284 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 FEM1BQ9UK73 627 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 AP4B1Q9Y6B7 739 aa11.98□□□□□ -0.49
SEC61A1-205ENST00000483956 CCDC162PA2VCL2 907 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 TMEM150BA6NC51 233 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 ATP2A1O14983 1001 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 PABPC1P11940 636 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 ACO1P21399 889 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 TRPC1P48995 793 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 PDK1Q15118 436 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 CNGA3Q16281 694 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 VASH1Q7L8A9 365 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 ABRAQ8N0Z2 381 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 POMGNT1Q8WZA1 660 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 C11orf70Q9BRQ4 267 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 TDRD3Q9H7E2 651 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 VPS37BQ9H9H4 285 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 CNOT3O75175 753 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 ZBTB11O95625 1053 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 STIP1P31948 543 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 ALDH1A3P47895 512 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 JAK3P52333 1124 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 GPS1Q13098 491 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 SEPT6Q14141 434 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 OASLQ15646 514 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 HSF5Q4G112 596 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 FAM209AQ5JX71 171 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 PEX5LQ8IYB4 626 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 NKD2Q969F2 451 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 ELMO3Q96BJ8 720 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 DCUN1D5Q9BTE7 237 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 DHRS4Q9BTZ2 278 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 NRDE2Q9H7Z3 1164 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 PCDH9Q9HC56 1237 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 KMT5AQ9NQR1 393 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 IP6K2Q9UHH9 426 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 ZBTB21Q9ULJ3 1066 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 FAM47E-STBD1D6RA91 191 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 CASQ2O14958 399 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 TM9SF1O15321 606 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 PEX1O43933 1283 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 ICAM1P05362 532 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 ITGAVP06756 1048 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 BGNP21810 368 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 MTMR1Q13613 665 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 TBC1D10BQ4KMP7 808 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 C2CD6Q53TS8 623 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 BRDTQ58F21 947 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 XKR9Q5GH70 373 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 RALGPS1Q5JS13 557 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 OGFRL1Q5TC84 451 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 SEPT12Q8IYM1 358 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 TMCO5AQ8N6Q1 288 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 SENP7Q9BQF6 1050 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 SH2D3AQ9BRG2 576 aa11.97□□□□□ -0.49
SEC61A1-205ENST00000483956 KIFC3Q9BVG8 833 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms