RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 ISCUQ9H1K1 167 aa18.65■□□□□ 0.58
CPNE1-224ENST00000483359 TDP1Q9NUW8 608 aa18.65■□□□□ 0.58
CPNE1-224ENST00000483359 PRKAG3Q9UGI9 489 aa18.65■□□□□ 0.58
CPNE1-224ENST00000483359 HELZP42694 1942 aaKnown RBP18.65■□□□□ 0.58
CPNE1-224ENST00000483359 LOC730098B7Z3J9 87 aa18.64■□□□□ 0.58
CPNE1-224ENST00000483359 MSI1O43347 362 aaKnown RBP18.64■□□□□ 0.58
CPNE1-224ENST00000483359 PPP1R2P3Q6NXS1 205 aa18.64■□□□□ 0.58
CPNE1-224ENST00000483359 TADA2BQ86TJ2 420 aa18.64■□□□□ 0.58
CPNE1-224ENST00000483359 RIN3Q8TB24 985 aa18.64■□□□□ 0.58
CPNE1-224ENST00000483359 SELENOOQ9BVL4 669 aa18.64■□□□□ 0.58
CPNE1-224ENST00000483359 THAP2Q9H0W7 228 aa18.64■□□□□ 0.58
CPNE1-224ENST00000483359 ZFP14Q9HCL3 533 aa18.64■□□□□ 0.58
CPNE1-224ENST00000483359 GKN1Q9NS71 199 aa18.64■□□□□ 0.58
CPNE1-224ENST00000483359 MARCH2Q9P0N8 246 aa18.64■□□□□ 0.58
CPNE1-224ENST00000483359 CNOT8Q9UFF9 292 aaKnown RBP18.64■□□□□ 0.58
CPNE1-224ENST00000483359 ZMYM5Q9UJ78 669 aa18.64■□□□□ 0.58
CPNE1-224ENST00000483359 DNMT3LQ9UJW3 386 aa18.64■□□□□ 0.58
CPNE1-224ENST00000483359 SYNJ2BP-COX16A0A087WUM0 186 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 DPYSL4O14531 572 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 DAB1O75553 588 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 HMBSP08397 361 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 FLT3P36888 993 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 PITX1P78337 314 aaPredicted RBP18.64■□□□□ 0.57
CPNE1-224ENST00000483359 HTR4Q13639 388 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 TJAP1Q5JTD0 557 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 TMTC1Q8IUR5 882 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 TMEM139Q8IV31 216 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 PLCD3Q8N3E9 789 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 C3orf20Q8ND61 904 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 JOSD2Q8TAC2 188 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 CDK5RAP1Q96SZ6 601 aaKnown RBP18.64■□□□□ 0.57
CPNE1-224ENST00000483359 ASNSD1Q9NWL6 643 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 COX16Q9P0S2 106 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 WDR35Q9P2L0 1181 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 NENFQ9UMX5 172 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 A0A0C4DFX4 3053 aa18.64■□□□□ 0.57
CPNE1-224ENST00000483359 ZNF263O14978 683 aa18.63■□□□□ 0.57
CPNE1-224ENST00000483359 GLI1P08151 1106 aa18.63■□□□□ 0.57
CPNE1-224ENST00000483359 KRT3P12035 628 aa18.63■□□□□ 0.57
CPNE1-224ENST00000483359 FECHP22830 423 aa18.63■□□□□ 0.57
CPNE1-224ENST00000483359 SLC7A9P82251 487 aa18.63■□□□□ 0.57
CPNE1-224ENST00000483359 GRM2Q14416 872 aa18.63■□□□□ 0.57
CPNE1-224ENST00000483359 MTSS1LQ765P7 747 aa18.63■□□□□ 0.57
CPNE1-224ENST00000483359 DQX1Q8TE96 717 aaKnown RBP18.63■□□□□ 0.57
CPNE1-224ENST00000483359 SH3RF2Q8TEC5 729 aa18.63■□□□□ 0.57
CPNE1-224ENST00000483359 ZFRQ96KR1 1074 aaKnown RBP18.63■□□□□ 0.57
CPNE1-224ENST00000483359 MCEEQ96PE7 176 aa18.63■□□□□ 0.57
CPNE1-224ENST00000483359 SLC2A13Q96QE2 648 aa18.63■□□□□ 0.57
CPNE1-224ENST00000483359 OLA1Q9NTK5 396 aaKnown RBP18.63■□□□□ 0.57
CPNE1-224ENST00000483359 ARHGAP26Q9UNA1 814 aa18.63■□□□□ 0.57
CPNE1-224ENST00000483359 SLC12A8A0AV02 714 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 HEPACAM2A8MVW5 462 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 TRNP1Q6NT89 227 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 RAD9BQ6WBX8 426 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 TAC4Q86UU9 113 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 ZDHHC14Q8IZN3 488 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 VCPIP1Q96JH7 1222 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 LRRC3BQ96PB8 259 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 TRIM62Q9BVG3 475 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 PLA2G2FQ9BZM2 168 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 KCNK12Q9HB15 430 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 TMEM59LQ9UK28 342 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 MUC3AQ02505 3323 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 SOBPA7XYQ1 873 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 LEFTY2O00292 366 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 PFKLP17858 780 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 CYLC1P35663 651 aaPredicted RBP18.62■□□□□ 0.57
CPNE1-224ENST00000483359 GALCP54803 685 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 GSCP56915 257 aaPredicted RBP18.62■□□□□ 0.57
CPNE1-224ENST00000483359 RPL7AP62424 266 aaKnown RBP18.62■□□□□ 0.57
CPNE1-224ENST00000483359 KLHDC10Q6PID8 442 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 VITQ6UXI7 678 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 CELF5Q8N6W0 485 aaKnown RBP18.62■□□□□ 0.57
CPNE1-224ENST00000483359 ADAMTS19Q8TE59 1207 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 WBP2Q969T9 261 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 ARHGEF26Q96DR7 871 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 TRIM11Q96F44 468 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 CFAP57Q96MR6 1250 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 FAM204AQ9H8W3 233 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.62■□□□□ 0.57
CPNE1-224ENST00000483359 CFAP97Q9P2B7 532 aa18.62■□□□□ 0.57
CPNE1-224ENST00000483359 TCRBV5S1A1TA0A578 114 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 ANHXE9PGG2 379 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 TFE3P19532 575 aaPredicted RBP18.61■□□□□ 0.57
CPNE1-224ENST00000483359 RFC1P35251 1148 aaPredicted RBP18.61■□□□□ 0.57
CPNE1-224ENST00000483359 SCNN1AP37088 669 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 MATKP42679 507 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 DCUN1D2Q6PH85 259 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 CCDC170Q8IYT3 715 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 KLF16Q9BXK1 252 aaPredicted RBP18.61■□□□□ 0.57
CPNE1-224ENST00000483359 SMOC2Q9H3U7 446 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 TRPV4Q9HBA0 871 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 PARVAQ9NVD7 372 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 NDUFA10O95299 355 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 PTMAP06454 111 aaKnown RBP18.61■□□□□ 0.57
CPNE1-224ENST00000483359 MYBL1P10243 752 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 SULT1E1P49888 294 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 NME3Q13232 169 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 MAMLD1Q13495 774 aa18.61■□□□□ 0.57
CPNE1-224ENST00000483359 CDO1Q16878 200 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms