RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 UGT1A7Q9HAW7 530 aa15.46■□□□□ 0.07
ATG4B-220ENST00000482507 UGT1A10Q9HAW8 530 aa15.46■□□□□ 0.07
ATG4B-220ENST00000482507 UGT1A8Q9HAW9 530 aa15.46■□□□□ 0.07
ATG4B-220ENST00000482507 RAB6BQ9NRW1 208 aa15.46■□□□□ 0.07
ATG4B-220ENST00000482507 TNFSF13BQ9Y275 285 aa15.46■□□□□ 0.07
ATG4B-220ENST00000482507 LRRC42Q9Y546 428 aa15.46■□□□□ 0.07
ATG4B-220ENST00000482507 PLXNB2O15031 1838 aa15.46■□□□□ 0.06
ATG4B-220ENST00000482507 NOP56O00567 594 aaKnown RBP15.45■□□□□ 0.06
ATG4B-220ENST00000482507 GAS2O43903 313 aaKnown RBP15.45■□□□□ 0.06
ATG4B-220ENST00000482507 HAUS5O94927 633 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 IL18RAPO95256 599 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 INHBAP08476 426 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 SERPINB4P48594 390 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 TRIM32Q13049 653 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 ACAP1Q15027 740 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 CA9Q16790 459 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 C4orf50Q6ZRC1 276 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 NAF1Q96HR8 494 aaKnown RBP15.45■□□□□ 0.06
ATG4B-220ENST00000482507 CNPY3Q9BT09 278 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 MECRQ9BV79 373 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 ABHD16BQ9H3Z7 469 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 IFT122Q9HBG6 1241 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 POPDC2Q9HBU9 364 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 TRIM49D1C9J1S8 452 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 CHADO15335 359 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 KCNN4O15554 427 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 HMGCRP04035 888 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 RBL1P28749 1068 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 CDK16Q00536 496 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 OR6B2Q6IFH4 312 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 RINLQ6ZS11 566 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 PLPPR4Q7Z2D5 763 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 PPM1NQ8N819 430 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 C12orf29Q8N999 325 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 PPP1R13LQ8WUF5 828 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 FAXDC2Q96IV6 333 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 CPB2Q96IY4 423 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 SRPK1Q96SB4 655 aaKnown RBP15.45■□□□□ 0.06
ATG4B-220ENST00000482507 ZNF395Q9H8N7 513 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-220ENST00000482507 VTA1Q9NP79 307 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 BATF3Q9NR55 127 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 PPME1Q9Y570 386 aa15.45■□□□□ 0.06
ATG4B-220ENST00000482507 ZSWIM8A7E2V4 1837 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 FAM237BA0A1B0GVD1 139 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 DNAJC6O75061 913 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 PTDSS1P48651 473 aaKnown RBP15.44■□□□□ 0.06
ATG4B-220ENST00000482507 RGS7P49802 495 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 NDST1P52848 882 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 CCDC14Q49A88 953 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 BTBD10Q9BSF8 475 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 RNPEPQ9H4A4 650 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 HEY1Q9Y5J3 304 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 IKBKGQ9Y6K9 419 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 GSC2O15499 205 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 VDRP11473 427 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 ELNP15502 786 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 MRPS5P82675 430 aaKnown RBP15.44■□□□□ 0.06
ATG4B-220ENST00000482507 ARHGAP1Q07960 439 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 BMPR2Q13873 1038 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 AMHR2Q16671 573 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 SLC10A6Q3KNW5 377 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 SLC26A11Q86WA9 606 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 CTAGE3PQ8IX95 158 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 PCDH19Q8TAB3 1148 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 AFG1LQ8WV93 481 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 TRIB2Q92519 343 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 APBA2Q99767 749 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 LBHD1Q9BQE6 289 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-220ENST00000482507 PNPLA8Q9NP80 782 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 ARHGEF4Q9NR80 690 aa15.44■□□□□ 0.06
ATG4B-220ENST00000482507 SMNDC1O75940 238 aaKnown RBP eCLIP15.43■□□□□ 0.063e-6■□□□□ 9.1
ATG4B-220ENST00000482507 TGDSO95455 350 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 MYL2P10916 166 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 OLFML2BQ68BL8 750 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 TRIM68Q6AZZ1 485 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 ALYREFQ86V81 257 aaKnown RBP15.43■□□□□ 0.06
ATG4B-220ENST00000482507 SOCS4Q8WXH5 440 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 KHSRPQ92945 711 aaKnown RBP eCLIP15.43■□□□□ 0.063e-7■■□□□ 12.3
ATG4B-220ENST00000482507 RTP4Q96DX8 246 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 HPDLQ96IR7 371 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 NSL1Q96IY1 281 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 MAGEB5Q9BZ81 275 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 PDZD7Q9H5P4 517 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 ARMCX1Q9P291 453 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 TSPAN16Q9UKR8 245 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 CYB561D2O14569 222 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 DYNC1LI2O43237 492 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-220ENST00000482507 KIF1CO43896 1103 aaKnown RBP15.43■□□□□ 0.06
ATG4B-220ENST00000482507 PRPSAP2O60256 369 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 CCDC22O60826 627 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 RFPL1O75677 317 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 GABBR2O75899 941 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 ZNF865P0CJ78 1059 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-220ENST00000482507 TFE3P19532 575 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-220ENST00000482507 IGBP1P78318 339 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 BLMHQ13867 455 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 TFDP2Q14188 446 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 FAM47CQ5HY64 1035 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 SCYL2Q6P3W7 929 aa15.43■□□□□ 0.06
ATG4B-220ENST00000482507 REM2Q8IYK8 340 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms