RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 MLLT3P42568 568 aaPredicted RBP12.12□□□□□ -0.47
HPS4-212ENST00000481910 PPP3CCP48454 512 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 RNASE9P60153 205 aaKnown RBP12.12□□□□□ -0.47
HPS4-212ENST00000481910 YWHAGP61981 247 aaKnown RBP eCLIP12.12□□□□□ -0.47
HPS4-212ENST00000481910 YWHAZP63104 245 aaKnown RBP12.12□□□□□ -0.47
HPS4-212ENST00000481910 NTHL1P78549 312 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 ATAT1Q5SQI0 421 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 BSPRYQ5W0U4 402 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 GAREM2Q75VX8 874 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 TMC8Q8IU68 726 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 ARHGAP18Q8N392 663 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 LEMD2Q8NC56 503 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 C3orf20Q8ND61 904 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 OVCA2Q8WZ82 227 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 MCRS1Q96EZ8 462 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 SH3GL3Q99963 347 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 SELENOOQ9BVL4 669 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 S1PR5Q9H228 398 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 ATXN3LQ9H3M9 355 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 IL21Q9HBE4 155 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 PARVAQ9NVD7 372 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 IRAK4Q9NWZ3 460 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 INTUQ9ULD6 942 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 ZKSCAN5Q9Y2L8 839 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 REXO2Q9Y3B8 237 aaKnown RBP12.12□□□□□ -0.47
HPS4-212ENST00000481910 C2orf16Q68DN1 1984 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 A0A1W2PRU2 124 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 FGF19O95750 216 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 LTFP02788 710 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 TMEM253P0C7T8 217 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 CDC25CP30307 473 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 PGFP49763 221 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 EPHA5P54756 1037 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 MAMLD1Q13495 774 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 CLUL1Q15846 466 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 BTBD8Q5XKL5 378 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 DNAJC24Q6P3W2 148 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 HFE2Q6ZVN8 426 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 SLC26A9Q7LBE3 791 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 BHLHA9Q7RTU4 235 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 SCD5Q86SK9 330 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 KIAA1328Q86T90 577 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 TMEM150AQ86TG1 271 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 MSLNLQ96KJ4 702 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 GCNAQ96QF7 691 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 NMUR1Q9HB89 426 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 MRPL47Q9HD33 250 aaKnown RBP12.11□□□□□ -0.47
HPS4-212ENST00000481910 METTL5Q9NRN9 209 aaKnown RBP12.11□□□□□ -0.47
HPS4-212ENST00000481910 ABCC13Q9NSE7 274 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 CDH22Q9UJ99 828 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 ZNF232Q9UNY5 417 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 ADGRG1Q9Y653 693 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 BRWD1Q9NSI6 2320 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 NCANO14594 1321 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.11□□□□□ -0.47
HPS4-212ENST00000481910 ZNF840PA6NDX5 716 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 SIGLEC16A6NMB1 481 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 H3BQ06 376 aaPredicted RBP12.11□□□□□ -0.47
HPS4-212ENST00000481910 ZNF197O14709 1029 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 CAPN9O14815 690 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 HSF2BPO75031 334 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 GJB6O95452 261 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 CYP1A2P05177 515 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 GLI1P08151 1106 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 CCDC175P0C221 793 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 ZDHHC11BP0C7U3 371 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 IMPDH2P12268 514 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 TNNT1P13805 278 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 GJA1P17302 382 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 KCNA5P22460 613 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 SCNN1AP37088 669 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 CCR2P41597 374 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 IFT88Q13099 833 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 PLEKHA7Q6IQ23 1121 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 DCUN1D2Q6PH85 259 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 ANKRD13BQ86YJ7 626 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 EDEM1Q92611 657 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 MRPS31Q92665 395 aaKnown RBP12.11□□□□□ -0.47
HPS4-212ENST00000481910 KHSRPQ92945 711 aaKnown RBP eCLIP12.11□□□□□ -0.47
HPS4-212ENST00000481910 ARHGEF26Q96DR7 871 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 UBE2ZQ9H832 354 aaPredicted RBP12.11□□□□□ -0.47
HPS4-212ENST00000481910 RMI1Q9H9A7 625 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 POPDC2Q9HBU9 364 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 AVENQ9NQS1 362 aaPredicted RBP12.11□□□□□ -0.47
HPS4-212ENST00000481910 ASNSD1Q9NWL6 643 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 OSER1Q9NX31 292 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 CD207Q9UJ71 328 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 TFR2Q9UP52 801 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 SCINQ9Y6U3 715 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 NOTCH4Q99466 2003 aa12.11□□□□□ -0.47
HPS4-212ENST00000481910 TCRBV5S1A1TA0A578 114 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 TADA3O75528 432 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 RALAP11233 206 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 NCAM1P13591 858 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 VAV2P52735 878 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 SLC5A9Q2M3M2 681 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 SNX30Q5VWJ9 437 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 TXLNBQ8N3L3 684 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 SMRP1Q8NCR6 262 aa12.1□□□□□ -0.47
HPS4-212ENST00000481910 C17orf50Q8WW18 174 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms