RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	BTF3	P20290	206 aa	Known RBP	3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	MCM5	P33992	734 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	U2AF1	Q01081	240 aa	Known RBP eCLIP	3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	TIAL1	Q01085	375 aa	Known RBP eCLIP	3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	CLEC9A	Q6UXN8	241 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	RANBP10	Q6VN20	620 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	DEF8	Q6ZN54	512 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	DCDC5	Q6ZRR9	648 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	C18orf65	Q6ZTR6	163 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	UNC13D	Q70J99	1090 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	SESTD1	Q86VW0	696 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	JDP2	Q8WYK2	163 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	LRTOMT	Q8WZ04	291 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	APIP	Q96GX9	242 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	SLCO5A1	Q9H2Y9	848 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	MLXIP	Q9HAP2	919 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	AS3MT	Q9HBK9	375 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	ZNF287	Q9HBT7	754 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	ZBTB40	Q9NUA8	1239 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	G3BP2	Q9UN86	482 aa	Known RBP	3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	ICK	Q9UPZ9	632 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	PAXBP1	Q9Y5B6	917 aa		3.91	□□□□□ -1.78
CCNL1-223	ENST00000481173	LOC105371045	A0A1W2PR82	267 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	C4orf47	A7E2U8	309 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	ERVV-2	B6SEH9	535 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173		M0R3H8	397 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	CLIC1	O00299	241 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	FRS3	O43559	492 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	TMPRSS11D	O60235	418 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	CNOT3	O75175	753 aa	Known RBP	3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	S100B	P04271	92 aa	Predicted RBP	3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	TXN	P10599	105 aa	Known RBP	3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	MYF5	P13349	255 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	ACVR2A	P27037	513 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	CPT1A	P50416	773 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	CACNB3	P54284	484 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	GRM3	Q14832	879 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	LARS2	Q15031	903 aa	Known RBP	3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	ANO7	Q6IWH7	933 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	PPP4R4	Q6NUP7	873 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	DARS2	Q6PI48	645 aa	Known RBP	3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	LIX1L	Q8IVB5	337 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	TCEAL8	Q8IYN2	117 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	DCP1B	Q8IZD4	617 aa	Known RBP	3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	LINC01465	Q8N7H1	131 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	IGFBPL1	Q8WX77	278 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	ZFYVE19	Q96K21	471 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	HIST1H2AA	Q96QV6	131 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	ZPBP	Q9BS86	351 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	LRRC27	Q9C0I9	530 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	USP29	Q9HBJ7	922 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	TBC1D23	Q9NUY8	699 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	DKK4	Q9UBT3	224 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	RIMKLB	Q9ULI2	386 aa		3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	3.9	□□□□□ -1.79
CCNL1-223	ENST00000481173	VSTM5	A8MXK1	200 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	FYB1	O15117	783 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	CA12	O43570	354 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	TGFB3	P10600	412 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	RPS13	P62277	151 aa	Known RBP	3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	YPEL5	P62699	121 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	SLC14A1	Q13336	389 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	KCNB1	Q14721	858 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	MFSD13A	Q14CX5	517 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	CC2D1B	Q5T0F9	858 aa	Known RBP	3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	DENND2C	Q68D51	928 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	PLAG1	Q6DJT9	500 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	NXN	Q6DKJ4	435 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	USP49	Q70CQ1	688 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	ADHFE1	Q8IWW8	467 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	YAF2	Q8IY57	180 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	C16orf71	Q8IYS4	520 aa	Predicted RBP	3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	C12orf76	Q8N812	135 aa	Predicted RBP	3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	EDC3	Q96F86	508 aa	Known RBP	3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	DHX36	Q9H2U1	1008 aa	Known RBP	3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	TXLNG	Q9NUQ3	528 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	NKX1-2	Q9UD57	310 aa	Predicted RBP	3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	TCEAL9	Q9UHQ7	104 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	SLC27A6	Q9Y2P4	619 aa		3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	FRMPD2	Q68DX3	1309 aa	Predicted RBP	3.89	□□□□□ -1.79
CCNL1-223	ENST00000481173	NOTCH4	Q99466	2003 aa		3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	LACTBL1	A8MY62	500 aa		3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	TPP1	O14773	563 aa		3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	TSPAN6	O43657	245 aa		3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	TNFRSF1B	P20333	461 aa		3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	CARS	P49589	748 aa	Known RBP	3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	CFHR3	Q02985	330 aa		3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	MTX1	Q13505	466 aa		3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	POLD3	Q15054	466 aa	Predicted RBP	3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	C4orf46	Q504U0	113 aa		3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	VSTM1	Q6UX27	236 aa		3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	C14orf80	Q86SX3	495 aa		3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	MYO1H	Q8N1T3	1032 aa		3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	SMCR8	Q8TEV9	937 aa	Predicted RBP	3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	TSR2	Q969E8	191 aa	Known RBP	3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	PRR11	Q96HE9	360 aa	Predicted RBP	3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	APOL5	Q9BWW9	433 aa		3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	HPSE	Q9Y251	543 aa		3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	PCDHGB6	Q9Y5F9	930 aa		3.88	□□□□□ -1.79
CCNL1-223	ENST00000481173	AQP7P3	A6NL99	342 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms