RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 GCSHP23434 173 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 RBL1P28749 1068 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 EPHA8P29322 1005 aaPredicted RBP5.85□□□□□ -1.47
COPA-203ENST00000481040 UQCRC1P31930 480 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 RAP1GAPP47736 663 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 GATMP50440 423 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 CREB5Q02930 508 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 CCNIQ14094 377 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 DCTN1Q14203 1278 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 ZNF568Q3ZCX4 644 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 TBC1D10BQ4KMP7 808 aaPredicted RBP5.85□□□□□ -1.47
COPA-203ENST00000481040 CBWD5Q5RIA9 395 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 CERCAMQ5T4B2 595 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 INO80CQ6PI98 192 aaPredicted RBP5.85□□□□□ -1.47
COPA-203ENST00000481040 KLHL24Q6TFL4 600 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 SPATA31D4Q6ZUB0 917 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 RALYLQ86SE5 291 aaKnown RBP5.85□□□□□ -1.47
COPA-203ENST00000481040 SHCBP1Q8NEM2 672 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 TMEM171Q8WVE6 324 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 USP6NLQ92738 828 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 ATP2A3Q93084 1043 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 PHACTR3Q96KR7 559 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 ZNF512Q96ME7 567 aaPredicted RBP5.85□□□□□ -1.47
COPA-203ENST00000481040 PAAF1Q9BRP4 392 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 SLC25A18Q9H1K4 315 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 TAOK3Q9H2K8 898 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 BRF2Q9HAW0 419 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 RPS6KA6Q9UK32 745 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 PCDHGB4Q9UN71 923 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 ZBTB1Q9Y2K1 713 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 GDAQ9Y2T3 454 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.85□□□□□ -1.47
COPA-203ENST00000481040 SNX8Q9Y5X2 465 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 FER1L4A9Z1Z3 1794 aa5.85□□□□□ -1.47
COPA-203ENST00000481040 ANP32CO43423 234 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 TSPAN9O75954 239 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 CSF1RP07333 972 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 HTR7P34969 479 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 RGS2P41220 211 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 HARS2P49590 506 aaKnown RBP5.84□□□□□ -1.47
COPA-203ENST00000481040 CHN2P52757 468 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 IFI35P80217 286 aaPredicted RBP5.84□□□□□ -1.47
COPA-203ENST00000481040 MC1RQ01726 317 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 DLX2Q07687 328 aaPredicted RBP5.84□□□□□ -1.47
COPA-203ENST00000481040 PTP4A2Q12974 167 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 CHAF1BQ13112 559 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 TDGQ13569 410 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 E2F2Q14209 437 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 PLCB4Q15147 1175 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 LRRC24Q50LG9 513 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 TMEM196Q5HYL7 178 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 ARHGAP40Q5TG30 622 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 MCTP2Q6DN12 878 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 DRICH1Q6PGQ1 229 aaPredicted RBP5.84□□□□□ -1.47
COPA-203ENST00000481040 FAM111BQ6SJ93 734 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 CLEC9AQ6UXN8 241 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 PIK3AP1Q6ZUJ8 805 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 SLC15A3Q8IY34 581 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 FSTL5Q8N475 847 aaPredicted RBP5.84□□□□□ -1.47
COPA-203ENST00000481040 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.84□□□□□ -1.47
COPA-203ENST00000481040 LSM14AQ8ND56 463 aaKnown RBP5.84□□□□□ -1.47
COPA-203ENST00000481040 METTL6Q8TCB7 284 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 REXO5Q96IC2 774 aaKnown RBP5.84□□□□□ -1.47
COPA-203ENST00000481040 PPP1R10Q96QC0 940 aaKnown RBP5.84□□□□□ -1.47
COPA-203ENST00000481040 PNKPQ96T60 521 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 YME1L1Q96TA2 773 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 CPPED1Q9BRF8 314 aaPredicted RBP5.84□□□□□ -1.47
COPA-203ENST00000481040 MXD3Q9BW11 206 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 STN1Q9H668 368 aaKnown RBP5.84□□□□□ -1.47
COPA-203ENST00000481040 AGO3Q9H9G7 860 aaKnown RBP5.84□□□□□ -1.47
COPA-203ENST00000481040 VEZTQ9HBM0 779 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 MRGBPQ9NV56 204 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 CLCA2Q9UQC9 943 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 SLC27A6Q9Y2P4 619 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 PCDHB7Q9Y5E2 793 aa5.84□□□□□ -1.47
COPA-203ENST00000481040 LOC105369274A0A096LPK9 316 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 LOC102723532A0A0G2JNH3 316 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 GXYLT2A0PJZ3 443 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 H7C0S8 307 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 MATN2O00339 956 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 TULP3O75386 442 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 GJB3O75712 270 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 HEXIM1O94992 359 aaKnown RBP5.83□□□□□ -1.48
COPA-203ENST00000481040 APOA4P06727 396 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 CSH1P0DML2 217 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 CSH2P0DML3 217 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 ITGALP20701 1170 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 IL11P20809 199 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 MGAT1P26572 445 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 EPHA3P29320 983 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 PPIFP30405 207 aaKnown RBP5.83□□□□□ -1.48
COPA-203ENST00000481040 NLRP5P59047 1200 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 RPS3AP61247 264 aaKnown RBP5.83□□□□□ -1.48
COPA-203ENST00000481040 TIAL1Q01085 375 aaKnown RBP eCLIP5.83□□□□□ -1.489e-9■■■■■ 29.1
COPA-203ENST00000481040 CALD1Q05682 793 aaKnown RBP5.83□□□□□ -1.48
COPA-203ENST00000481040 TBL3Q12788 808 aaKnown RBP5.83□□□□□ -1.48
COPA-203ENST00000481040 CDC16Q13042 620 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 DCTN2Q13561 401 aaKnown RBP5.83□□□□□ -1.48
COPA-203ENST00000481040 ACOX1Q15067 660 aa5.83□□□□□ -1.48
COPA-203ENST00000481040 TBCCQ15814 346 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms