RNA–Protein interactions for RNA: ENST00000480686.5

RNF220-213, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-213ENST00000480686 TTC30AQ86WT1 665 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 IQCF2Q8IXL9 164 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 ACTL9Q8TC94 416 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 VTA1Q9NP79 307 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 SLC9A2Q9UBY0 812 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 CAB39Q9Y376 341 aaPredicted RBP13.13□□□□□ -0.31
RNF220-213ENST00000480686 TBX22Q9Y458 520 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 SNX5Q9Y5X3 404 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 CRYBG1Q9Y4K1 1723 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 TMEM2Q9UHN6 1383 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 PNMA6FA0A0J9YX94 578 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 EIF3FO00303 357 aaPredicted RBP13.13□□□□□ -0.31
RNF220-213ENST00000480686 ZNF182P17025 639 aaPredicted RBP13.13□□□□□ -0.31
RNF220-213ENST00000480686 SLC30A10Q6XR72 485 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 TMEM26Q6ZUK4 368 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 CLIP3Q96DZ5 547 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 PNPOQ9NVS9 261 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 ZDHHC7Q9NXF8 308 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 SORCS3Q9UPU3 1222 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 ZBTB1Q9Y2K1 713 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 CEPT1Q9Y6K0 416 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 NUMBLQ9Y6R0 609 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 ASTN1O14525 1302 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 TNPO2O14787 897 aaKnown RBP13.13□□□□□ -0.31
RNF220-213ENST00000480686 PROSCO94903 275 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 PABPC1P11940 636 aaKnown RBP13.13□□□□□ -0.31
RNF220-213ENST00000480686 HOXA13P31271 388 aaPredicted RBP13.13□□□□□ -0.31
RNF220-213ENST00000480686 IST1P53990 364 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 SLC18A1P54219 525 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 ADGRE1Q14246 886 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 FAM182AQ5T1J6 154 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 TEDDM1Q5T9Z0 273 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 C12orf60Q5U649 245 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 BPIFB6Q8NFQ5 453 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 SHKBP1Q8TBC3 707 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 ISOC1Q96CN7 298 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 PLA2G12BQ9BX93 195 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 OSBPL11Q9BXB4 747 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 SLC4A5Q9BY07 1137 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 BCAS3Q9H6U6 928 aa13.13□□□□□ -0.31
RNF220-213ENST00000480686 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
RNF220-213ENST00000480686 PHGDHO43175 533 aaKnown RBP13.12□□□□□ -0.31
RNF220-213ENST00000480686 ADAM23O75077 832 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 KCNH1O95259 989 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 ATP2B4P23634 1241 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 RCVRNP35243 200 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 DLG4P78352 724 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 MTX3Q5HYI7 312 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 KCNT1Q5JUK3 1230 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 KRT39Q6A163 491 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 ADGRD1Q6QNK2 874 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 IFNEQ86WN2 208 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 AGAP3Q96P47 875 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 ACCSQ96QU6 501 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 CITED4Q96RK1 184 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 EIF2AK1Q9BQI3 630 aaKnown RBP13.12□□□□□ -0.31
RNF220-213ENST00000480686 SENP6Q9GZR1 1112 aaPredicted RBP13.12□□□□□ -0.31
RNF220-213ENST00000480686 COQ10BQ9H8M1 238 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 EFCAB1Q9HAE3 211 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 NEO1Q92859 1461 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 PCP4L1A6NKN8 68 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 SYCE1LA8MT33 242 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 USP17L10C9JJH3 530 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 BHMG1C9JSJ3 638 aaPredicted RBP13.12□□□□□ -0.31
RNF220-213ENST00000480686 IDH3BO43837 385 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 MAP3K6O95382 1288 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 FUCA1P04066 466 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 SMIM18P0DKX4 95 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 IVDP26440 423 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 SLC10A5Q5PT55 438 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 GJC2Q5T442 439 aaPredicted RBP13.12□□□□□ -0.31
RNF220-213ENST00000480686 SCARA3Q6AZY7 606 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 RWDD4Q6NW29 188 aaKnown RBP13.12□□□□□ -0.31
RNF220-213ENST00000480686 CCNYL1Q8N7R7 359 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 NSUN4Q96CB9 384 aaKnown RBP13.12□□□□□ -0.31
RNF220-213ENST00000480686 GLT8D2Q9H1C3 349 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 TOR1BO14657 336 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 P4HA1P13674 534 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 PSMA2P25787 234 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 EMP3P54852 163 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 ASPRV1Q53RT3 343 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 LRP10Q7Z4F1 713 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 PCDH20Q8N6Y1 951 aaKnown RBP13.12□□□□□ -0.31
RNF220-213ENST00000480686 EXD1Q8NHP7 514 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 OTUD5Q96G74 571 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 PCDH9Q9HC56 1237 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 IP6K2Q9UHH9 426 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 V9GYQ6 96 aa13.12□□□□□ -0.31
RNF220-213ENST00000480686 P4HBP07237 508 aaKnown RBP13.11□□□□□ -0.31
RNF220-213ENST00000480686 STMN1P16949 149 aa13.11□□□□□ -0.31
RNF220-213ENST00000480686 DNASE1L3Q13609 305 aa13.11□□□□□ -0.31
RNF220-213ENST00000480686 TRIM25Q14258 630 aaKnown RBP13.11□□□□□ -0.31
RNF220-213ENST00000480686 AOC3Q16853 763 aa13.11□□□□□ -0.31
RNF220-213ENST00000480686 N4BP2L1Q5TBK1 243 aaPredicted RBP13.11□□□□□ -0.31
RNF220-213ENST00000480686 HAS1Q92839 578 aa13.11□□□□□ -0.31
RNF220-213ENST00000480686 PKP2Q99959 881 aa13.11□□□□□ -0.31
RNF220-213ENST00000480686 POLR3CQ9BUI4 534 aaPredicted RBP13.11□□□□□ -0.31
RNF220-213ENST00000480686 DGCR6LQ9BY27 220 aa13.11□□□□□ -0.31
RNF220-213ENST00000480686 ZFYVE28Q9HCC9 887 aa13.11□□□□□ -0.31
RNF220-213ENST00000480686 CD209Q9NNX6 404 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms