RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 ADGRF2Q8IZF7 708 aa17.48■□□□□ 0.39
SH3D21-203ENST00000480549 UHMK1Q8TAS1 419 aaKnown RBP17.48■□□□□ 0.39
SH3D21-203ENST00000480549 TMEM121Q9BTD3 319 aa17.48■□□□□ 0.39
SH3D21-203ENST00000480549 SNX25Q9H3E2 840 aa17.48■□□□□ 0.39
SH3D21-203ENST00000480549 FAM105AQ9NUU6 356 aa17.48■□□□□ 0.39
SH3D21-203ENST00000480549 ZMYND8Q9ULU4 1186 aaPredicted RBP17.48■□□□□ 0.39
SH3D21-203ENST00000480549 ADORA2BP29275 332 aa17.47■□□□□ 0.39
SH3D21-203ENST00000480549 BCAT1P54687 386 aa17.47■□□□□ 0.39
SH3D21-203ENST00000480549 BST2Q10589 180 aaKnown RBP17.47■□□□□ 0.39
SH3D21-203ENST00000480549 PGM2Q96G03 612 aa17.47■□□□□ 0.39
SH3D21-203ENST00000480549 XPO6Q96QU8 1125 aaKnown RBP17.47■□□□□ 0.39
SH3D21-203ENST00000480549 GALNT8Q9NY28 637 aa17.47■□□□□ 0.39
SH3D21-203ENST00000480549 DNALI1O14645 258 aaPredicted RBP17.47■□□□□ 0.39
SH3D21-203ENST00000480549 HGSO14964 777 aaPredicted RBP17.47■□□□□ 0.39
SH3D21-203ENST00000480549 WARSP23381 471 aaKnown RBP17.47■□□□□ 0.39
SH3D21-203ENST00000480549 DYNC1I2Q13409 638 aaKnown RBP17.47■□□□□ 0.39
SH3D21-203ENST00000480549 CDO1Q16878 200 aa17.47■□□□□ 0.39
SH3D21-203ENST00000480549 SDCCAG8Q86SQ7 713 aaPredicted RBP17.47■□□□□ 0.39
SH3D21-203ENST00000480549 ZDHHC17Q8IUH5 632 aa17.47■□□□□ 0.39
SH3D21-203ENST00000480549 TOP6BLQ8N6T0 577 aa17.47■□□□□ 0.39
SH3D21-203ENST00000480549 CLEC4CQ8WTT0 213 aa17.47■□□□□ 0.39
SH3D21-203ENST00000480549 HHIPL1Q96JK4 782 aa17.47■□□□□ 0.39
SH3D21-203ENST00000480549 SPC25Q9HBM1 224 aa17.47■□□□□ 0.39
SH3D21-203ENST00000480549 DNAJC17Q9NVM6 304 aaKnown RBP17.47■□□□□ 0.39
SH3D21-203ENST00000480549 SAMD15Q9P1V8 674 aa17.47■□□□□ 0.39
SH3D21-203ENST00000480549 THSD7BQ9C0I4 1608 aa17.47■□□□□ 0.39
SH3D21-203ENST00000480549 SP100P23497 879 aaPredicted RBP17.46■□□□□ 0.39
SH3D21-203ENST00000480549 TKTP29401 623 aaKnown RBP17.46■□□□□ 0.39
SH3D21-203ENST00000480549 FAM47CQ5HY64 1035 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 RSPH3Q86UC2 560 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 FRMD8P1Q9BZ68 369 aaPredicted RBP17.46■□□□□ 0.39
SH3D21-203ENST00000480549 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.46■□□□□ 0.39
SH3D21-203ENST00000480549 HUS1O60921 280 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 CCND3P30281 292 aaPredicted RBP17.46■□□□□ 0.39
SH3D21-203ENST00000480549 MSH2P43246 934 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 AFF1P51825 1210 aaKnown RBP17.46■□□□□ 0.39
SH3D21-203ENST00000480549 CYP4F22Q6NT55 531 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 RELL1Q8IUW5 271 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 TTC13Q8NBP0 860 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 SLC2A14Q8TDB8 520 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 EPS8L3Q8TE67 593 aaKnown RBP17.46■□□□□ 0.39
SH3D21-203ENST00000480549 PPP1R12CQ9BZL4 782 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 XPNPEP3Q9NQH7 507 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 CACNG4Q9UBN1 327 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 TRIM33Q9UPN9 1127 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 HTTP42858 3142 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 ASGR1P07306 291 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 MMRN1Q13201 1228 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 RFX6Q8HWS3 928 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 DTNBP1Q96EV8 351 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 RSAD1Q9HA92 442 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 PCDH9Q9HC56 1237 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 CHST12Q9NRB3 414 aa17.46■□□□□ 0.39
SH3D21-203ENST00000480549 ACSL3O95573 720 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 TTC4O95801 387 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 VIMP08670 466 aaKnown RBP17.45■□□□□ 0.38
SH3D21-203ENST00000480549 MLH1P40692 756 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 DPYSL3Q14195 570 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 CCDC142Q17RM4 750 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 MFSD4BQ5TF39 518 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 CCSAPQ6IQ19 270 aaPredicted RBP17.45■□□□□ 0.38
SH3D21-203ENST00000480549 LRRC34Q8IZ02 419 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 ZCCHC9Q8N567 271 aaKnown RBP17.45■□□□□ 0.38
SH3D21-203ENST00000480549 KLHDC9Q8NEP7 349 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 FAM172AQ8WUF8 416 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 SELENOSQ9BQE4 189 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 C11orf84Q9BUA3 381 aaPredicted RBP17.45■□□□□ 0.38
SH3D21-203ENST00000480549 CALN1Q9BXU9 219 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 C10orf88Q9H8K7 445 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 AGO3Q9H9G7 860 aaKnown RBP17.45■□□□□ 0.38
SH3D21-203ENST00000480549 CYLDQ9NQC7 956 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 NINJ2Q9NZG7 142 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 NKX1-2Q9UD57 310 aaPredicted RBP17.45■□□□□ 0.38
SH3D21-203ENST00000480549 APOC4-APOC2K7ER74 178 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 PRPSAP2O60256 369 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 APOC2P02655 101 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 GDF10P55107 478 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 CDH6P55285 790 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 SNX16P57768 344 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 GPS1Q13098 491 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 TNFAIP8L3Q5GJ75 292 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 B3GALNT2Q8NCR0 500 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 PHC3Q8NDX5 983 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 ADAM33Q9BZ11 813 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 RHBDL2Q9NX52 303 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 MIOSQ9NXC5 875 aa17.45■□□□□ 0.38
SH3D21-203ENST00000480549 SGK1O00141 431 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 TPD52L2O43399 206 aaKnown RBP17.44■□□□□ 0.38
SH3D21-203ENST00000480549 TFE3P19532 575 aaPredicted RBP17.44■□□□□ 0.38
SH3D21-203ENST00000480549 SDC4P31431 198 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 PLCB3Q01970 1234 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 KLC1Q07866 573 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 KCNA10Q16322 511 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 KYNUQ16719 465 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 SLC26A9Q7LBE3 791 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 ARL10Q8N8L6 244 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 LPPQ93052 612 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 GAD1Q99259 594 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 CYB561D2O14569 222 aa17.44■□□□□ 0.38
SH3D21-203ENST00000480549 HDAC4P56524 1084 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms