RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 HTR3DQ70Z44 454 aa18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 RASSF3Q86WH2 238 aa18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 UBA3Q8TBC4 463 aa18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 KAT5Q92993 513 aa18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 ZC3H10Q96K80 434 aaKnown RBP18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 CNOT6LQ96LI5 555 aaKnown RBP18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 SLC6A17Q9H1V8 727 aa18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 CD93Q9NPY3 652 aa18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 DNMT3LQ9UJW3 386 aa18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 LSM7Q9UK45 103 aaKnown RBP18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 RAD54BQ9Y620 910 aa18.29■□□□□ 0.52
ECHDC1-216ENST00000479525 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 PRRT4C9JH25 899 aa18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 SMC2O95347 1197 aa18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 KLKB1P03952 638 aa18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 CD19P15391 556 aa18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 EIF2DP41214 584 aaKnown RBP18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 FKBP3Q00688 224 aaKnown RBP18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 USP39Q53GS9 565 aaKnown RBP18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 PLA2G2CQ5R387 149 aa18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 PMS2CLQ68D20 193 aa18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 GRAMD4Q6IC98 578 aa18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 ZC3H3Q8IXZ2 948 aaKnown RBP18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 TMEFF1Q8IYR6 380 aa18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 SLC35C1Q96A29 364 aa18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 OTUB2Q96DC9 234 aa18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 CCDC34Q96HJ3 373 aa18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 GSDMAQ96QA5 445 aa18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 ULBP1Q9BZM6 244 aa18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 MBD1Q9UIS9 605 aaPredicted RBP18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 TSPAN16Q9UKR8 245 aa18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 CTNND2Q9UQB3 1225 aa18.28■□□□□ 0.52
ECHDC1-216ENST00000479525 GON4LQ3T8J9 2241 aa18.27■□□□□ 0.51
ECHDC1-216ENST00000479525 CAVIN2O95810 425 aa18.27■□□□□ 0.51
ECHDC1-216ENST00000479525 BMP6P22004 513 aa18.27■□□□□ 0.51
ECHDC1-216ENST00000479525 NUCB2P80303 420 aa18.27■□□□□ 0.51
ECHDC1-216ENST00000479525 PDE4CQ08493 712 aa18.27■□□□□ 0.51
ECHDC1-216ENST00000479525 CUL2Q13617 745 aa18.27■□□□□ 0.51
ECHDC1-216ENST00000479525 CCDC186Q7Z3E2 898 aa18.27■□□□□ 0.51
ECHDC1-216ENST00000479525 SPATA20Q8TB22 786 aa18.27■□□□□ 0.51
ECHDC1-216ENST00000479525 LOXL4Q96JB6 756 aa18.27■□□□□ 0.51
ECHDC1-216ENST00000479525 DUSP9Q99956 384 aaKnown RBP18.27■□□□□ 0.51
ECHDC1-216ENST00000479525 ARMCX3Q9UH62 379 aaPredicted RBP18.27■□□□□ 0.51
ECHDC1-216ENST00000479525 USP3Q9Y6I4 520 aa18.27■□□□□ 0.51
ECHDC1-216ENST00000479525 PI4KAP42356 2102 aa18.27■□□□□ 0.51
ECHDC1-216ENST00000479525 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 WASH3PC4AMC7 463 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 SLC16A3O15427 465 aaKnown RBP18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 RHOBTB1O94844 696 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 SDHBP21912 280 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 CORO1AP31146 461 aaKnown RBP18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 TNFRSF4P43489 277 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 RGS7P49802 495 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 TKTL1P51854 596 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 ENPEPQ07075 957 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 GOLGA8FQ08AF8 430 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 GOLGA8DPQ0D2H9 430 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 CCDC40Q4G0X9 1142 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 EOGTQ5NDL2 527 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 STPG1Q5TH74 334 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 KIAA1211LQ6NV74 962 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 Q6ZNB5 142 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 PIGKQ92643 395 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 PNPLA8Q9NP80 782 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 POLMQ9NP87 494 aaPredicted RBP18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 FSCN3Q9NQT6 498 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 CACNA2D2Q9NY47 1150 aa18.26■□□□□ 0.51
ECHDC1-216ENST00000479525 A0A0A0MRY4 1105 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 SLC12A8A0AV02 714 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 BCLAF3A2AJT9 711 aaKnown RBP18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 STX10O60499 249 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 ALDH1A2O94788 518 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 RALAP11233 206 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 HOXB2P14652 356 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 PLA2G4AP47712 749 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 YWHAGP61981 247 aaKnown RBP eCLIP18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 ADIGQ0VDE8 80 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 ARHGAP17Q68EM7 881 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 IL31Q6EBC2 164 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 RSRC2Q7L4I2 434 aaKnown RBP18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 BHLHA9Q7RTU4 235 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 DENND1CQ8IV53 801 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 KIAA1958Q8N8K9 716 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 NELFBQ8WX92 580 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 EDEM1Q92611 657 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 CNTNAP3BQ96NU0 1288 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 EDEM2Q9BV94 578 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 CNTNAP3Q9BZ76 1288 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 SFMBT1Q9UHJ3 866 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 CLEC4EQ9ULY5 219 aa18.25■□□□□ 0.51
ECHDC1-216ENST00000479525 RNF225M0QZC1 329 aaPredicted RBP18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 CACNG3O60359 315 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 LCP1P13796 627 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 GABRG2P18507 467 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 P2RY2P41231 377 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 PTGER3P43115 390 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 FMO5P49326 533 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 DGKGP49619 791 aa18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 MCCD1P59942 119 aaPredicted RBP18.24■□□□□ 0.51
ECHDC1-216ENST00000479525 COBLL1Q53SF7 1204 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms