RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 PRKAR1BP31321 381 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 BCAT1P54687 386 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 SCAPQ12770 1279 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 FOXE3Q13461 319 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 TP53BP2Q13625 1128 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 ZACNQ401N2 412 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 INO80DQ53TQ3 878 aaPredicted RBP5.83□□□□□ -1.48
RFC4-212ENST00000479307 LY6G5CQ5SRR4 150 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 FAXCQ5TGI0 409 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 ABHD17BQ5VST6 288 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 KCNV1Q6PIU1 500 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 CRTC1Q6UUV9 634 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 KCTD20Q7Z5Y7 419 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 GPR149Q86SP6 731 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 DTX2Q86UW9 622 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 CERS3Q8IU89 383 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 DNAJB14Q8TBM8 379 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 SSH3Q8TE77 659 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 LTV1Q96GA3 475 aaPredicted RBP5.83□□□□□ -1.48
RFC4-212ENST00000479307 ZDHHC12Q96GR4 267 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 ACTRT3Q9BYD9 372 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 NRDE2Q9H7Z3 1164 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 PPCSQ9HAB8 311 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 AGO4Q9HCK5 861 aaKnown RBP5.83□□□□□ -1.48
RFC4-212ENST00000479307 SERTAD3Q9UJW9 196 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 HPSEQ9Y251 543 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 AKAP12Q02952 1782 aa5.83□□□□□ -1.48
RFC4-212ENST00000479307 CENPVL1A0A0U1RR11 272 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 SYT5O00445 386 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 NBNO60934 754 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 GLP2RO95838 553 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 EGR2P11161 476 aaPredicted RBP5.82□□□□□ -1.48
RFC4-212ENST00000479307 MST1P26927 711 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 EPHA3P29320 983 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 PDIA3P30101 505 aaKnown RBP5.82□□□□□ -1.48
RFC4-212ENST00000479307 ATICP31939 592 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 GRK6P43250 576 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 ITGA8P53708 1063 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 NSUN2Q08J23 767 aaKnown RBP eCLIP5.82□□□□□ -1.48
RFC4-212ENST00000479307 ELF2Q15723 593 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 SLC15A2Q16348 729 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 TUBB8Q3ZCM7 444 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 CCDC38Q502W7 563 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.82□□□□□ -1.48
RFC4-212ENST00000479307 MANEALQ5VSG8 457 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 TLDC1Q6P9B6 456 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 CCDC28AQ8IWP9 274 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 ABRAQ8N0Z2 381 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 NKAPQ8N5F7 415 aaKnown RBP5.82□□□□□ -1.48
RFC4-212ENST00000479307 SPATA5Q8NB90 893 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 SLC30A5Q8TAD4 765 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 FAM71BQ8TC56 605 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 SH3RF3Q8TEJ3 882 aaPredicted RBP5.82□□□□□ -1.48
RFC4-212ENST00000479307 OSCP1Q8WVF1 389 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 PGBD1Q96JS3 809 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 RMDN3Q96TC7 470 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 PCDHAC1Q9H158 963 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 SLC25A32Q9H2D1 315 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 GBA2Q9HCG7 927 aaPredicted RBP5.82□□□□□ -1.48
RFC4-212ENST00000479307 TMOD4Q9NZQ9 345 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 DNAJB11Q9UBS4 358 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 ANKRD50Q9ULJ7 1429 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 LMO7Q8WWI1 1683 aa5.82□□□□□ -1.48
RFC4-212ENST00000479307 KIF1BO60333 1816 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 PIPSLA2A3N6 862 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 NPC1O15118 1278 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 CCNT2O60583 730 aaKnown RBP5.81□□□□□ -1.48
RFC4-212ENST00000479307 LPXNO60711 386 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 ITGAMP11215 1152 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 HALP42357 657 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 TIAL1Q01085 375 aaKnown RBP eCLIP5.81□□□□□ -1.48
RFC4-212ENST00000479307 PTK2BQ14289 1009 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 SPARCL1Q14515 664 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 KCNAB1Q14722 419 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 SF3B3Q15393 1217 aaKnown RBP5.81□□□□□ -1.48
RFC4-212ENST00000479307 PFKFB4Q16877 469 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 PTCHD3Q3KNS1 767 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 VWA1Q6PCB0 445 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 CCDC174Q6PII3 467 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 PRRT2Q7Z6L0 340 aaPredicted RBP5.81□□□□□ -1.48
RFC4-212ENST00000479307 MRGPREQ86SM8 312 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 ANKRD42Q8N9B4 389 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 PROKR1Q8TCW9 393 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 ATG4AQ8WYN0 398 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 CCT6BQ92526 530 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 C18orf8Q96DM3 657 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 ALG8Q9BVK2 526 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 INO80BQ9C086 356 aaPredicted RBP5.81□□□□□ -1.48
RFC4-212ENST00000479307 KCTD5Q9NXV2 234 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 TESQ9UGI8 421 aaKnown RBP5.81□□□□□ -1.48
RFC4-212ENST00000479307 ZMYND8Q9ULU4 1186 aaPredicted RBP5.81□□□□□ -1.48
RFC4-212ENST00000479307 BCL9O00512 1426 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 SSH2Q76I76 1423 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 TUBGCP6Q96RT7 1819 aa5.81□□□□□ -1.48
RFC4-212ENST00000479307 PPLO60437 1756 aa5.8□□□□□ -1.48
RFC4-212ENST00000479307 OR2W5A6NFC9 320 aa5.8□□□□□ -1.48
RFC4-212ENST00000479307 LGALS16A8MUM7 142 aa5.8□□□□□ -1.48
RFC4-212ENST00000479307 PPM1DO15297 605 aa5.8□□□□□ -1.48
RFC4-212ENST00000479307 SLC16A3O15427 465 aaKnown RBP5.8□□□□□ -1.48
RFC4-212ENST00000479307 UQCRC1P31930 480 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms