RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 FAM170BA6NMN3 283 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 EPHB6O15197 1021 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 CALCAP01258 141 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 LTFP02788 710 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 LCP1P13796 627 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 SCNN1AP37088 669 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 RGS7P49802 495 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 KLK7P49862 253 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 TNK2Q07912 1038 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 NNTQ13423 1086 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 FZD5Q13467 585 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 DGKKQ5KSL6 1271 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 Q6ZNB5 142 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 LUZP1Q86V48 1076 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 CCDC105Q8IYK2 499 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 C1orf131Q8NDD1 294 aaKnown RBP16.2■□□□□ 0.18
C9orf3-217ENST00000479161 RNF139Q8WU17 664 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 GOLGA1Q92805 767 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 LINC00597Q9H2U6 94 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 SMPD4Q9NXE4 827 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 MARCH2Q9P0N8 246 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 CYTH4Q9UIA0 394 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 LSM7Q9UK45 103 aaKnown RBP16.2■□□□□ 0.18
C9orf3-217ENST00000479161 HCN4Q9Y3Q4 1203 aa16.2■□□□□ 0.18
C9orf3-217ENST00000479161 PIEZO1Q92508 2521 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 OTOL1A6NHN0 477 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-217ENST00000479161 STK25O00506 426 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 TEX33O43247 280 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 PAPSS1O43252 624 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-217ENST00000479161 STC2O76061 302 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 LATS1O95835 1130 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 SERPINC1P01008 464 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 ARSAP15289 507 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 TARSP26639 723 aaKnown RBP16.19■□□□□ 0.18
C9orf3-217ENST00000479161 GJA4P35212 333 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 GABRB2P47870 512 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 VCPP55072 806 aaKnown RBP16.19■□□□□ 0.18
C9orf3-217ENST00000479161 RING1Q06587 406 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 TRIP4Q15650 581 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-217ENST00000479161 EFHC1Q5JVL4 640 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 TRIM72Q6ZMU5 477 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 RSRC2Q7L4I2 434 aaKnown RBP16.19■□□□□ 0.18
C9orf3-217ENST00000479161 SCUBE3Q8IX30 993 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 AZIN2Q96A70 460 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 PLD4Q96BZ4 506 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 PPP1R13BQ96KQ4 1090 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 PCMTD1Q96MG8 357 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-217ENST00000479161 NAP1L5Q96NT1 182 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-217ENST00000479161 ST7Q9NRC1 585 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 NOCTQ9UK39 431 aaKnown RBP16.19■□□□□ 0.18
C9orf3-217ENST00000479161 WNT6Q9Y6F9 365 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 WDFY4Q6ZS81 3184 aa16.19■□□□□ 0.18
C9orf3-217ENST00000479161 A0A0A0MRY4 1105 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 E5RJQ4 531 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 HOXC11O43248 304 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-217ENST00000479161 GALR2O43603 387 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-217ENST00000479161 PI15O43692 258 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 ADH1CP00326 375 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 PNMA6AP0CW24 399 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-217ENST00000479161 CHRNB1P11230 501 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 DRD1P21728 446 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 ZNF445P59923 1031 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 YWHAZP63104 245 aaKnown RBP16.18■□□□□ 0.18
C9orf3-217ENST00000479161 FANCCQ00597 558 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 CDR2Q01850 454 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 LRRC32Q14392 662 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 DHCR24Q15392 516 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 TMEM196Q5HYL7 178 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 TRIM68Q6AZZ1 485 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 RHBDF2Q6PJF5 856 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 ARCQ7LC44 396 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 NOP9Q86U38 636 aaKnown RBP16.18■□□□□ 0.18
C9orf3-217ENST00000479161 FAM217AQ8IXS0 508 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 ZNF397Q8NF99 534 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-217ENST00000479161 CCDC26Q8TAB7 109 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 CHFRQ96EP1 664 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 CPXM1Q96SM3 734 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 NUP58Q9BVL2 599 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 FOXQ1Q9C009 403 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 POPDC2Q9HBU9 364 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 NLRC4Q9NPP4 1024 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 MARK1Q9P0L2 795 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 STOML2Q9UJZ1 356 aa16.18■□□□□ 0.18
C9orf3-217ENST00000479161 IGLV3-27P01718 113 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 CYP17A1P05093 508 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 FYNP06241 537 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 CHKAP35790 457 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 PBX1P40424 430 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 EFEMP1Q12805 493 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 CCINQ13939 588 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 UBXN2BQ14CS0 331 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 FBXO43Q4G163 708 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 PREPLQ4J6C6 727 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-217ENST00000479161 TXNDC11Q6PKC3 985 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 SLC26A9Q7LBE3 791 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 CACNA2D4Q7Z3S7 1137 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 CPXM2Q8N436 756 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 DTWD2Q8NBA8 298 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 MSANTD4Q8NCY6 345 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 IPO4Q8TEX9 1081 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms