RNA–Protein interactions for RNA: ENST00000477741.5

NELFCD-205, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-205ENST00000477741 AP1M1Q9BXS5 423 aa14.93□□□□□ -0.02
NELFCD-205ENST00000477741 CARD9Q9H257 536 aa14.93□□□□□ -0.02
NELFCD-205ENST00000477741 FBXO44Q9H4M3 255 aa14.93□□□□□ -0.02
NELFCD-205ENST00000477741 UNC80Q8N2C7 3258 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 KRT1P04264 644 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 KRT10P13645 584 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 EPCAMP16422 314 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 PCK1P35558 622 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 UBE3AQ05086 875 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 C2orf54Q08AI8 447 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 MFSD7Q6UXD7 560 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 MON1AQ86VX9 555 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 PYROXD2Q8N2H3 581 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 RASGEF1CQ8N431 466 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 KREMEN2Q8NCW0 462 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 SNRNP25Q9BV90 132 aaKnown RBP14.92□□□□□ -0.02
NELFCD-205ENST00000477741 EMILIN2Q9BXX0 1053 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 CCSER2Q9H7U1 834 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 ZNF334Q9HCZ1 680 aaPredicted RBP14.92□□□□□ -0.02
NELFCD-205ENST00000477741 WDR6Q9NNW5 1121 aaKnown RBP14.92□□□□□ -0.02
NELFCD-205ENST00000477741 DDIT4Q9NX09 232 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 STK39Q9UEW8 545 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 FBXW11Q9UKB1 542 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 SSX2IPQ9Y2D8 614 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 C5orf42Q9H799 3197 aa14.92□□□□□ -0.02
NELFCD-205ENST00000477741 LRRD1A4D1F6 860 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 C3orf70A6NLC5 250 aaPredicted RBP14.91□□□□□ -0.02
NELFCD-205ENST00000477741 PRPSAP2O60256 369 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 TADA3O75528 432 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 RTN3O95197 1032 aaPredicted RBP14.91□□□□□ -0.02
NELFCD-205ENST00000477741 C8AP07357 584 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 GGCXP38435 758 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 DEUP1Q05D60 604 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 MMRN1Q13201 1228 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 ACAP1Q15027 740 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 WHAMMP3Q1A5X7 153 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 DNAJB7Q7Z6W7 309 aaPredicted RBP14.91□□□□□ -0.02
NELFCD-205ENST00000477741 CCDC50Q8IVM0 306 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 KATNAL2Q8IYT4 538 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 NOA1Q8NC60 698 aaKnown RBP14.91□□□□□ -0.02
NELFCD-205ENST00000477741 TSC1Q92574 1164 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 GOLGA1Q92805 767 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 PBKQ96KB5 322 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 TTLL2Q9BWV7 592 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 SLC28A3Q9HAS3 691 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 ABCC13Q9NSE7 274 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.91□□□□□ -0.02
NELFCD-205ENST00000477741 MSRAQ9UJ68 235 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 STAP1Q9ULZ2 295 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 MYO9BQ13459 2157 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 GLUD1P00367 558 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 RARGP13631 454 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 GTF2F1P35269 517 aaKnown RBP eCLIP14.91□□□□□ -0.02
NELFCD-205ENST00000477741 CREMQ03060 361 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 CCDC181Q5TID7 509 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 LRRC38Q5VT99 294 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 KAZNQ674X7 775 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 STRADAQ7RTN6 431 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 SLITRK1Q96PX8 696 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 FAM118BQ9BPY3 351 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 EPC1Q9H2F5 836 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 FAM204AQ9H8W3 233 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 RBM12Q9NTZ6 932 aaKnown RBP14.91□□□□□ -0.02
NELFCD-205ENST00000477741 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.91□□□□□ -0.02
NELFCD-205ENST00000477741 HSFX1Q9UBD0 423 aa14.91□□□□□ -0.02
NELFCD-205ENST00000477741 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.91□□□□□ -0.02
NELFCD-205ENST00000477741 CLASP2O75122 1294 aaKnown RBP14.9□□□□□ -0.02
NELFCD-205ENST00000477741 ENDOD1O94919 500 aa14.9□□□□□ -0.02
NELFCD-205ENST00000477741 ZRANB2O95218 330 aaKnown RBP eCLIP14.9□□□□□ -0.02
NELFCD-205ENST00000477741 SLU7O95391 586 aaKnown RBP14.9□□□□□ -0.02
NELFCD-205ENST00000477741 RALAP11233 206 aa14.9□□□□□ -0.02
NELFCD-205ENST00000477741 RDXP35241 583 aaKnown RBP14.9□□□□□ -0.02
NELFCD-205ENST00000477741 HADHQ16836 314 aaKnown RBP14.9□□□□□ -0.02
NELFCD-205ENST00000477741 ZNF697Q5TEC3 545 aa14.9□□□□□ -0.02
NELFCD-205ENST00000477741 TMEM150AQ86TG1 271 aa14.9□□□□□ -0.02
NELFCD-205ENST00000477741 HS6ST3Q8IZP7 471 aa14.9□□□□□ -0.02
NELFCD-205ENST00000477741 ZNF512Q96ME7 567 aaPredicted RBP14.9□□□□□ -0.02
NELFCD-205ENST00000477741 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.9□□□□□ -0.02
NELFCD-205ENST00000477741 LCMT1Q9UIC8 334 aa14.9□□□□□ -0.02
NELFCD-205ENST00000477741 SNX10Q9Y5X0 201 aa14.9□□□□□ -0.02
NELFCD-205ENST00000477741 CCL16O15467 120 aa14.89□□□□□ -0.03
NELFCD-205ENST00000477741 IGLV3-25P01717 112 aa14.89□□□□□ -0.03
NELFCD-205ENST00000477741 ZDHHC11BP0C7U3 371 aa14.89□□□□□ -0.03
NELFCD-205ENST00000477741 KDELR1P24390 212 aa14.89□□□□□ -0.03
NELFCD-205ENST00000477741 BMP8BP34820 402 aa14.89□□□□□ -0.03
NELFCD-205ENST00000477741 EFEMP1Q12805 493 aa14.89□□□□□ -0.03
NELFCD-205ENST00000477741 EIF4EBP2Q13542 120 aaPredicted RBP14.89□□□□□ -0.03
NELFCD-205ENST00000477741 LONRF2Q1L5Z9 754 aa14.89□□□□□ -0.03
NELFCD-205ENST00000477741 RSRC2Q7L4I2 434 aaKnown RBP14.89□□□□□ -0.03
NELFCD-205ENST00000477741 POLNQ7Z5Q5 900 aa14.89□□□□□ -0.03
NELFCD-205ENST00000477741 MIB1Q86YT6 1006 aa14.89□□□□□ -0.03
NELFCD-205ENST00000477741 SPATA4Q8NEY3 305 aa14.89□□□□□ -0.03
NELFCD-205ENST00000477741 ACTRT1Q8TDG2 376 aa14.89□□□□□ -0.03
NELFCD-205ENST00000477741 PLEKHA4Q9H4M7 779 aa14.89□□□□□ -0.03
NELFCD-205ENST00000477741 MAN1C1Q9NR34 630 aa14.89□□□□□ -0.03
NELFCD-205ENST00000477741 HCFC1R1Q9NWW0 138 aa14.89□□□□□ -0.03
NELFCD-205ENST00000477741 XPO7Q9UIA9 1087 aaKnown RBP14.89□□□□□ -0.03
NELFCD-205ENST00000477741 COL4A4P53420 1690 aaPredicted RBP14.89□□□□□ -0.03
NELFCD-205ENST00000477741 PLXNA3P51805 1871 aa14.89□□□□□ -0.03
NELFCD-205ENST00000477741 MYO16Q9Y6X6 1858 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms