RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 RRAGCQ9HB90 399 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 KLHL11Q9NVR0 708 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 HOXC10Q9NYD6 342 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 PTPRFP10586 1907 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 hCG_2014768A0A024R1R8 64 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 MEI4A8MW99 385 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 TRIM49D1C9J1S8 452 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 TRMUO75648 421 aaKnown RBP15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 CALB1P05937 261 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 ZFXP17010 805 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 L1CAMP32004 1257 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 DSG3P32926 999 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 SPIDRQ14159 915 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 PIGHQ14442 188 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 LPIN1Q14693 890 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 TLR1Q15399 786 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 KBTBD12Q3ZCT8 623 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 WDR44Q5JSH3 913 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 LLGL2Q6P1M3 1020 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 KBTBD6Q86V97 674 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 PQLC1Q8N2U9 271 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 NIPA2Q8N8Q9 360 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 ZSWIM2Q8NEG5 633 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 BIRC8Q96P09 236 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 SMYD3Q9H7B4 428 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 ZNF408Q9H9D4 720 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 FAIMQ9NVQ4 179 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 POMPQ9Y244 141 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 TMEM191CA6NGB0 347 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 TMEM63AO94886 807 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 LYPLA2O95372 231 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 P4HBP07237 508 aaKnown RBP15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 TMEM191BP0C7N4 346 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 RPL22P35268 128 aaKnown RBP15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 STX3Q13277 289 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 CNGA3Q16281 694 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 RABGAP1LQ5R372 815 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 ZFP1Q6P2D0 407 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 METTL25Q8N6Q8 603 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 ABTB1Q969K4 478 aaPredicted RBP15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 HAUS8Q9BT25 410 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 SENP6Q9GZR1 1112 aaPredicted RBP15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 XAB2Q9HCS7 855 aaKnown RBP15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 HOMER2Q9NSB8 354 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 BCAP29Q9UHQ4 241 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 ZNHIT2Q9UHR6 403 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 INPP5FQ9Y2H2 1132 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 H3BNX3 289 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 BPGMP07738 259 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 WEE2P0C1S8 567 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 SLC25A3Q00325 362 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 UBAP2LQ14157 1087 aaKnown RBP15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 MYLK3Q32MK0 819 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 STXBP5Q5T5C0 1151 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 DHRS4L2Q6PKH6 230 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 BBS12Q6ZW61 710 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 ERI1Q8IV48 349 aaKnown RBP15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 ZFP28Q8NHY6 868 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 GCNAQ96QF7 691 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 APOBEC2Q9Y235 224 aaKnown RBP15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 NR2E3Q9Y5X4 410 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 TEX264Q9Y6I9 313 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 IVNS1ABPQ9Y6Y0 642 aa15.79■□□□□ 0.12
CLSTN1-205ENST00000477264 COL11A1P12107 1806 aaPredicted RBP15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 A0A0B4J269 797 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 KBTBD13C9JR72 458 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 E9PBE3 544 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 TRDMT1O14717 391 aaKnown RBP15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 DNAJA2O60884 412 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 KRT38O76015 456 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 FAM58BPP0C7Q3 252 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 ELK3P41970 407 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 RARRES1P49788 294 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 OAZ1P54368 228 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 EPHB1P54762 984 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 PSMC5P62195 406 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 GAD2Q05329 585 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 TUBB3Q13509 450 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 GADL1Q6ZQY3 521 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 C15orf39Q6ZRI6 1047 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 TSHZ1Q6ZSZ6 1077 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 MIER3Q7Z3K6 550 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 ZNF410Q86VK4 478 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 BBS5Q8N3I7 341 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 FBXW8Q8N3Y1 598 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 ADCY4Q8NFM4 1077 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 GRIP2Q9C0E4 1043 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 TOPORSQ9NS56 1045 aaPredicted RBP15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 DNAJC28Q9NX36 388 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 AK5Q9Y6K8 562 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 RLFQ13129 1914 aa15.78■□□□□ 0.12
CLSTN1-205ENST00000477264 CXCL11O14625 94 aa15.77■□□□□ 0.12
CLSTN1-205ENST00000477264 GNA15P30679 374 aa15.77■□□□□ 0.12
CLSTN1-205ENST00000477264 ERFP50548 548 aa15.77■□□□□ 0.12
CLSTN1-205ENST00000477264 GALK1P51570 392 aa15.77■□□□□ 0.12
CLSTN1-205ENST00000477264 YWHAGP61981 247 aaKnown RBP eCLIP15.77■□□□□ 0.12
CLSTN1-205ENST00000477264 OTUD4Q01804 1114 aaKnown RBP15.77■□□□□ 0.12
CLSTN1-205ENST00000477264 SLC44A4Q53GD3 710 aa15.77■□□□□ 0.12
CLSTN1-205ENST00000477264 SMYD1Q8NB12 490 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms