RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 FATE1Q969F0 183 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 LRRC45Q96CN5 670 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 TTC14Q96N46 770 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 BPIFA3Q9BQP9 254 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 CCDC28BQ9BUN5 200 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 CAPS2Q9BXY5 557 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 EIF2AQ9BY44 585 aaKnown RBP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 UPF3BQ9BZI7 483 aaKnown RBP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 YIPF3Q9GZM5 350 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 FAM192AQ9GZU8 254 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 NUP62CLQ9H1M0 184 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 GOLPH3LQ9H4A5 285 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 GREM2Q9H772 168 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 METTL14Q9HCE5 456 aaKnown RBP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 DMAP1Q9NPF5 467 aaPredicted RBP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 WDR35Q9P2L0 1181 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 RUVBL1Q9Y265 456 aaKnown RBP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 SSX2IPQ9Y2D8 614 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 ASB3Q9Y575 518 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 BZW2Q9Y6E2 419 aaKnown RBP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 COMMD10Q9Y6G5 202 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 PRAMEF33A0A0G2JMD5 474 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 VWC2LB2RUY7 222 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 ANKRD65E5RJM6 399 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 P4HA2O15460 535 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 CYTH3O43739 400 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 MGEA5O60502 916 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 PRAMEF10O60809 474 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 URI1O94763 535 aaPredicted RBP4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 LINGO3P0C6S8 592 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 ALAS1P13196 640 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 TCF7P36402 384 aaPredicted RBP4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 SLC6A9P48067 706 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 CTCFP49711 727 aaPredicted RBP4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 CSE1LP55060 971 aaKnown RBP4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 MRPS9P82933 396 aaKnown RBP4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 POU5F1Q01860 360 aaKnown RBP4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 SULT2A1Q06520 285 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 KIF5AQ12840 1032 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 CBX3Q13185 183 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 CD300EQ496F6 205 aaPredicted RBP4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 ATP13A4Q4VNC1 1196 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 LACTB2Q53H82 288 aaPredicted RBP4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 RUSC1-AS1Q66K80 236 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 CCDC70Q6NSX1 233 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 FAM180AQ6UWF9 173 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 ATF7IPQ6VMQ6 1270 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 SRGAP1Q7Z6B7 1085 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 CEP57L1Q8IYX8 460 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 SYCP3Q8IZU3 236 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 ZGPATQ8N5A5 531 aaKnown RBP4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 VPS37AQ8NEZ2 397 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 CFAP61Q8NHU2 1237 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 MYCBPAPQ8TBZ2 947 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 NSMCE1Q8WV22 266 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 DYDC1Q8WWB3 177 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 PGBD1Q96JS3 809 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 PRAM1Q96QH2 718 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 CGREF1Q99674 301 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 SH3GL2Q99962 352 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 ADGRE3Q9BY15 652 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 MRPL46Q9H2W6 279 aaKnown RBP4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 ZBTB40Q9NUA8 1239 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 TMEM140Q9NV12 185 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 C6orf203Q9P0P8 240 aaPredicted RBP4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 MYO1AQ9UBC5 1043 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 RABL2AQ9UBK7 228 aaPredicted RBP4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 NRBP1Q9UHY1 535 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 TPCN1Q9ULQ1 816 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 SH3GLB1Q9Y371 365 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 N6AMT1Q9Y5N5 214 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 PTPRKQ15262 1439 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 FAM135BQ49AJ0 1406 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 CASKIN1Q8WXD9 1431 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 ERBINQ96RT1 1412 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 BIVM-ERCC5R4GMW8 1640 aa4.79□□□□□ -1.64
PIKFYVE-209ENST00000477200 LAMC3Q9Y6N6 1575 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 UBN2Q6ZU65 1347 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 FRMD3A2A2Y4 597 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 WDR27A2RRH5 827 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 CFAP73A6NFT4 308 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 E7ENQ6 273 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 NDUFAB1O14561 156 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 TEX33O43247 280 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 SKAP2O75563 359 aaPredicted RBP4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 STAM2O75886 525 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 BBOX1O75936 387 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 FLOT1O75955 427 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 GSTA1P08263 222 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 EPB41P11171 864 aaKnown RBP4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 TOP1P11387 765 aaKnown RBP4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 SFPQP23246 707 aaKnown RBP eCLIP4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 ATICP31939 592 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 KRT9P35527 623 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 ACADVLP49748 655 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 ZNF132P52740 706 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 TUBA1BP68363 451 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 FPGSQ05932 587 aa4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 EIF4A2Q14240 407 aaKnown RBP4.78□□□□□ -1.64
PIKFYVE-209ENST00000477200 MUM1Q2TAK8 710 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms