RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 SCAF8Q9UPN6 1271 aaKnown RBP6.41□□□□□ -1.38
CDKN1B-204ENST00000477087 NOC2LQ9Y3T9 749 aaKnown RBP6.41□□□□□ -1.38
CDKN1B-204ENST00000477087 BAZ2BQ9UIF8 2168 aaKnown RBP6.41□□□□□ -1.38
CDKN1B-204ENST00000477087 LCHNA4D1U4 455 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 STRNO43815 780 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 MARCH6O60337 910 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 DKC1O60832 514 aaKnown RBP eCLIP6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 SEC24DO94855 1032 aaPredicted RBP6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 SLITRK3O94933 977 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 ALAS1P13196 640 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 EDNRBP24530 442 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 STAT6P42226 847 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 MGAT5Q09328 741 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 ANO6Q4KMQ2 910 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 PRR16Q569H4 304 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 SPECC1Q5M775 1068 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 ZNF658Q5TYW1 1059 aaPredicted RBP6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 FNDC7Q5VTL7 733 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 BROXQ5VW32 411 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 CCDC174Q6PII3 467 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 KCNV1Q6PIU1 500 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 PLA2G4DQ86XP0 818 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 GLB1L2Q8IW92 636 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 CPXCR1Q8N123 301 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 SYT2Q8N9I0 419 aaPredicted RBP6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 TMEM174Q8WUU8 243 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 RSAD2Q8WXG1 361 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 CCDC47Q96A33 483 aaKnown RBP6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 OPTNQ96CV9 577 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 CLIP3Q96DZ5 547 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 DHTKD1Q96HY7 919 aaPredicted RBP6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 RMDN3Q96TC7 470 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 TRIM9Q9C026 710 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 SPATC1LQ9H0A9 340 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 MS4A5Q9H3V2 200 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 GBA2Q9HCG7 927 aaPredicted RBP6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 PXMP2Q9NR77 195 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 SLC2A4RGQ9NR83 387 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 RNF146Q9NTX7 359 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 BLOC1S4Q9NUP1 217 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 CYP39A1Q9NYL5 469 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 MORF4L1Q9UBU8 362 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 ADD3Q9UEY8 706 aaKnown RBP6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 MAN1B1Q9UKM7 699 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 MAPRE3Q9UPY8 281 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 RIPK3Q9Y572 518 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 NUMBLQ9Y6R0 609 aa6.4□□□□□ -1.38
CDKN1B-204ENST00000477087 PFASO15067 1338 aa6.4□□□□□ -1.39
CDKN1B-204ENST00000477087 NFASCO94856 1347 aa6.4□□□□□ -1.39
CDKN1B-204ENST00000477087 TCHHQ07283 1943 aa6.4□□□□□ -1.39
CDKN1B-204ENST00000477087 FRMD3A2A2Y4 597 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 BECN2A8MW95 431 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 IPO5O00410 1097 aaKnown RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 KLRC4O43908 158 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 RPN1P04843 607 aaKnown RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 TPM3P06753 285 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 SCP2P22307 547 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 HOXA13P31271 388 aaPredicted RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 SFNP31947 248 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 RABGGTBP53611 331 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 SNAP25P60880 206 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 TPM4P67936 248 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 IRX3P78415 501 aaPredicted RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 MRPS9P82933 396 aaKnown RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 DUSP2Q05923 314 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 PNOCQ13519 176 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 BAATQ14032 418 aaPredicted RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 KARSQ15046 597 aaKnown RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 PGM5Q15124 567 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 ATP13A4Q4VNC1 1196 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 MUM1L1Q5H9M0 696 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 DCAF17Q5H9S7 520 aaPredicted RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 SNRNP48Q6IEG0 339 aaKnown RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 UNC13DQ70J99 1090 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 TAS1R1Q7RTX1 841 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 CATSPER3Q86XQ3 398 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 DHX40Q8IX18 779 aaKnown RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 SMAP1Q8IYB5 467 aaPredicted RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 MSL3Q8N5Y2 521 aaKnown RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 PDILTQ8N807 584 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 FAM133AQ8N9E0 248 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 LARP4BQ92615 738 aaKnown RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 RAD54LQ92698 747 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 DHX58Q96C10 678 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 TAAR1Q96RJ0 339 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 MPHOSPH6Q99547 160 aaKnown RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 CPPED1Q9BRF8 314 aaPredicted RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 TIPINQ9BVW5 301 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 PANK2Q9BZ23 570 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 AGO4Q9HCK5 861 aaKnown RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 A1CFQ9NQ94 594 aaKnown RBP6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 COL20A1Q9P218 1284 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 DNM3Q9UQ16 869 aa6.39□□□□□ -1.39
CDKN1B-204ENST00000477087 MANSC4A6NHS7 340 aaPredicted RBP6.38□□□□□ -1.39
CDKN1B-204ENST00000477087 GOLGA6L19H0YKK7 550 aa6.38□□□□□ -1.39
CDKN1B-204ENST00000477087 FAM20BO75063 409 aa6.38□□□□□ -1.39
CDKN1B-204ENST00000477087 CNMDO75829 334 aa6.38□□□□□ -1.39
CDKN1B-204ENST00000477087 STC2O76061 302 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms