RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 DHX35Q9H5Z1 703 aaKnown RBP23.98■■□□□ 1.43
CCDC7-206ENST00000476558 NRDE2Q9H7Z3 1164 aa23.98■■□□□ 1.43
CCDC7-206ENST00000476558 PNPLA8Q9NP80 782 aa23.98■■□□□ 1.43
CCDC7-206ENST00000476558 USP3Q9Y6I4 520 aa23.98■■□□□ 1.43
CCDC7-206ENST00000476558 PATJQ8NI35 1801 aa23.97■■□□□ 1.43
CCDC7-206ENST00000476558 OAZ2O95190 189 aa23.97■■□□□ 1.43
CCDC7-206ENST00000476558 ZBED1O96006 694 aa23.97■■□□□ 1.43
CCDC7-206ENST00000476558 IFNB1P01574 187 aa23.97■■□□□ 1.43
CCDC7-206ENST00000476558 STIP1P31948 543 aaKnown RBP23.97■■□□□ 1.43
CCDC7-206ENST00000476558 PPP6R3Q5H9R7 873 aaPredicted RBP23.97■■□□□ 1.43
CCDC7-206ENST00000476558 AGBL2Q5U5Z8 902 aa23.97■■□□□ 1.43
CCDC7-206ENST00000476558 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.97■■□□□ 1.43
CCDC7-206ENST00000476558 DNAJB4Q9UDY4 337 aa23.97■■□□□ 1.43
CCDC7-206ENST00000476558 NAALADL1Q9UQQ1 740 aa23.97■■□□□ 1.43
CCDC7-206ENST00000476558 FARP1Q9Y4F1 1045 aaPredicted RBP23.97■■□□□ 1.43
CCDC7-206ENST00000476558 NDC80O14777 642 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 USP17L7P0C7H9 530 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 CYP2F1P24903 491 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 RPL22P35268 128 aaKnown RBP23.96■■□□□ 1.43
CCDC7-206ENST00000476558 YWHAHQ04917 246 aaPredicted RBP23.96■■□□□ 1.43
CCDC7-206ENST00000476558 FAM131BQ86XD5 332 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 RSAD2Q8WXG1 361 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 IRGQQ8WZA9 623 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 PGAP3Q96FM1 320 aaPredicted RBP23.96■■□□□ 1.43
CCDC7-206ENST00000476558 USP29Q9HBJ7 922 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 DMAP1Q9NPF5 467 aaPredicted RBP23.96■■□□□ 1.43
CCDC7-206ENST00000476558 TET1Q8NFU7 2136 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 M0QYT0 321 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 TTC4O95801 387 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 RDXP35241 583 aaKnown RBP23.96■■□□□ 1.43
CCDC7-206ENST00000476558 BCAR1P56945 870 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 TSPY1Q01534 308 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 IFFO1Q0D2I5 559 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 TCTN1Q2MV58 587 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 C1orf228Q6PIY5 440 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 CSPG4P5Q96PW8 444 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 SLC9A7Q96T83 725 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 CWC15Q9P013 229 aaKnown RBP23.96■■□□□ 1.43
CCDC7-206ENST00000476558 RCOR3Q9P2K3 495 aaPredicted RBP23.96■■□□□ 1.43
CCDC7-206ENST00000476558 SHOC2Q9UQ13 582 aa23.96■■□□□ 1.43
CCDC7-206ENST00000476558 LTFP02788 710 aa23.95■■□□□ 1.42
CCDC7-206ENST00000476558 CCL5P13501 91 aa23.95■■□□□ 1.42
CCDC7-206ENST00000476558 SKOR1P84550 965 aa23.95■■□□□ 1.42
CCDC7-206ENST00000476558 ROR1Q01973 937 aa23.95■■□□□ 1.42
CCDC7-206ENST00000476558 FAM71DQ8N9W8 422 aa23.95■■□□□ 1.42
CCDC7-206ENST00000476558 SEPT8Q92599 483 aa23.95■■□□□ 1.42
CCDC7-206ENST00000476558 APBB2Q92870 758 aa23.95■■□□□ 1.42
CCDC7-206ENST00000476558 RTP4Q96DX8 246 aa23.95■■□□□ 1.42
CCDC7-206ENST00000476558 CASD1Q96PB1 797 aa23.95■■□□□ 1.42
CCDC7-206ENST00000476558 PIGVQ9NUD9 493 aa23.95■■□□□ 1.42
CCDC7-206ENST00000476558 TTC3P53804 2025 aa23.95■■□□□ 1.42
CCDC7-206ENST00000476558 OR1G1P47890 313 aa23.94■■□□□ 1.42
CCDC7-206ENST00000476558 RNASELQ05823 741 aaKnown RBP23.94■■□□□ 1.42
CCDC7-206ENST00000476558 KRT71Q3SY84 523 aa23.94■■□□□ 1.42
CCDC7-206ENST00000476558 CEP128Q6ZU80 1094 aa23.94■■□□□ 1.42
CCDC7-206ENST00000476558 PCGF5Q86SE9 256 aa23.94■■□□□ 1.42
CCDC7-206ENST00000476558 ZC3H18Q86VM9 953 aaKnown RBP23.94■■□□□ 1.42
CCDC7-206ENST00000476558 PYROXD2Q8N2H3 581 aa23.94■■□□□ 1.42
CCDC7-206ENST00000476558 PRCCQ92733 491 aaPredicted RBP23.94■■□□□ 1.42
CCDC7-206ENST00000476558 WDR6Q9NNW5 1121 aaKnown RBP23.94■■□□□ 1.42
CCDC7-206ENST00000476558 RRN3Q9NYV6 651 aa23.94■■□□□ 1.42
CCDC7-206ENST00000476558 PCDHB7Q9Y5E2 793 aa23.94■■□□□ 1.42
CCDC7-206ENST00000476558 ZFXP17010 805 aaPredicted RBP23.94■■□□□ 1.42
CCDC7-206ENST00000476558 DARS2Q6PI48 645 aaKnown RBP23.94■■□□□ 1.42
CCDC7-206ENST00000476558 ANKRD33Q7Z3H0 272 aa23.94■■□□□ 1.42
CCDC7-206ENST00000476558 CTU1Q7Z7A3 348 aaKnown RBP23.94■■□□□ 1.42
CCDC7-206ENST00000476558 PGM2Q96G03 612 aa23.94■■□□□ 1.42
CCDC7-206ENST00000476558 RBM15Q96T37 977 aaKnown RBP eCLIP23.94■■□□□ 1.42
CCDC7-206ENST00000476558 ZCWPW1Q9H0M4 648 aa23.94■■□□□ 1.42
CCDC7-206ENST00000476558 PRDM16Q9HAZ2 1276 aa23.94■■□□□ 1.42
CCDC7-206ENST00000476558 DNAJC17Q9NVM6 304 aaKnown RBP23.94■■□□□ 1.42
CCDC7-206ENST00000476558 NINJ2Q9NZG7 142 aa23.94■■□□□ 1.42
CCDC7-206ENST00000476558 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.93■■□□□ 1.42
CCDC7-206ENST00000476558 BCLAF3A2AJT9 711 aaKnown RBP23.93■■□□□ 1.42
CCDC7-206ENST00000476558 MNX1P50219 401 aaPredicted RBP23.93■■□□□ 1.42
CCDC7-206ENST00000476558 AIF1P55008 147 aa23.93■■□□□ 1.42
CCDC7-206ENST00000476558 DEUP1Q05D60 604 aa23.93■■□□□ 1.42
CCDC7-206ENST00000476558 KYNUQ16719 465 aa23.93■■□□□ 1.42
CCDC7-206ENST00000476558 KDM7AQ6ZMT4 941 aa23.93■■□□□ 1.42
CCDC7-206ENST00000476558 CROCCP2Q86T23 111 aa23.93■■□□□ 1.42
CCDC7-206ENST00000476558 HOOK3Q86VS8 718 aa23.93■■□□□ 1.42
CCDC7-206ENST00000476558 NAT8LQ8N9F0 302 aa23.93■■□□□ 1.42
CCDC7-206ENST00000476558 CPT1BQ92523 772 aa23.93■■□□□ 1.42
CCDC7-206ENST00000476558 TLCD1Q96CP7 247 aa23.93■■□□□ 1.42
CCDC7-206ENST00000476558 FAM193BQ96PV7 902 aaPredicted RBP23.93■■□□□ 1.42
CCDC7-206ENST00000476558 RNF208Q9H0X6 261 aa23.93■■□□□ 1.42
CCDC7-206ENST00000476558 TANC1Q9C0D5 1861 aa23.92■■□□□ 1.42
CCDC7-206ENST00000476558 CAPN9O14815 690 aa23.92■■□□□ 1.42
CCDC7-206ENST00000476558 TRAPPC3O43617 180 aa23.92■■□□□ 1.42
CCDC7-206ENST00000476558 SHOX2O60902 331 aaPredicted RBP23.92■■□□□ 1.42
CCDC7-206ENST00000476558 MYCP01106 439 aaPredicted RBP23.92■■□□□ 1.42
CCDC7-206ENST00000476558 CXCL10P02778 98 aa23.92■■□□□ 1.42
CCDC7-206ENST00000476558 NR2C2P49116 596 aa23.92■■□□□ 1.42
CCDC7-206ENST00000476558 CTCFP49711 727 aaPredicted RBP23.92■■□□□ 1.42
CCDC7-206ENST00000476558 SLC10A2Q12908 348 aaPredicted RBP23.92■■□□□ 1.42
CCDC7-206ENST00000476558 C4orf50Q6ZRC1 276 aa23.92■■□□□ 1.42
CCDC7-206ENST00000476558 BEND5Q7L4P6 421 aa23.92■■□□□ 1.42
CCDC7-206ENST00000476558 PPIL6Q8IXY8 311 aa23.92■■□□□ 1.42
CCDC7-206ENST00000476558 NTAN1Q96AB6 310 aa23.92■■□□□ 1.42
CCDC7-206ENST00000476558 PRG3Q9Y2Y8 225 aaPredicted RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms