RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 VSTM1Q6UX27 236 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.64□□□□□ -0.715e-10■■■■■ 39.4
PCCB-213ENST00000475214 CYP4V2Q6ZWL3 525 aaPredicted RBP10.64□□□□□ -0.71
PCCB-213ENST00000475214 C16orf59Q7L2K0 433 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 PSTKQ8IV42 348 aaKnown RBP10.64□□□□□ -0.71
PCCB-213ENST00000475214 KRT222Q8N1A0 295 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 BBOF1Q8ND07 529 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 CCHCR1Q8TD31 782 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 NDRG1Q92597 394 aaKnown RBP10.64□□□□□ -0.71
PCCB-213ENST00000475214 NT5C3BQ969T7 300 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 LRRC45Q96CN5 670 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 RNF157Q96PX1 679 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 NPY6RQ99463 290 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 RHOBTB2Q9BYZ6 727 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 RAB6CQ9H0N0 254 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 ZNF576Q9H609 170 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 PCDH18Q9HCL0 1135 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 MARCH5Q9NX47 278 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 FAM53CQ9NYF3 392 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 MTRF1LQ9UGC7 380 aaKnown RBP10.64□□□□□ -0.71
PCCB-213ENST00000475214 ASIC3Q9UHC3 531 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 ZNF148Q9UQR1 794 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 PCDHB5Q9Y5E4 795 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 SLC4A7Q9Y6M7 1214 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 TET1Q8NFU7 2136 aa10.64□□□□□ -0.71
PCCB-213ENST00000475214 FNDC1Q4ZHG4 1894 aaPredicted RBP10.64□□□□□ -0.71
PCCB-213ENST00000475214 CUL9Q8IWT3 2517 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 YJEFN3A6XGL0 299 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 ZBBXA8MT70 800 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 ZNF487B1APH4 448 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 E7ENQ6 273 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 APOC4-APOC2K7ER74 178 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 NDC80O14777 642 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 APOL1O14791 398 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 TRIM66O15016 1216 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 DGKIO75912 1065 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 F9P00740 461 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 KRT14P02533 472 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 APOC2P02655 101 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 ITGAVP06756 1048 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 OR4Q2P0C623 313 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 FAM153BP0C7A2 387 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 NCAM1P13591 858 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 ATF2P15336 505 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 ZFXP17010 805 aaPredicted RBP10.63□□□□□ -0.71
PCCB-213ENST00000475214 TFE3P19532 575 aaPredicted RBP10.63□□□□□ -0.71
PCCB-213ENST00000475214 ITIH2P19823 946 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 CYP2F1P24903 491 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 RABGGTBP53611 331 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 PLTPP55058 493 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 VCPP55072 806 aaKnown RBP10.63□□□□□ -0.71
PCCB-213ENST00000475214 DYNLT1P63172 113 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 OTUD4Q01804 1114 aaKnown RBP10.63□□□□□ -0.71
PCCB-213ENST00000475214 CAV1Q03135 178 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 SMARCB1Q12824 385 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 DPYSL2Q16555 572 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 FAM153CQ494X1 144 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 ZC3H12AQ5D1E8 599 aaKnown RBP10.63□□□□□ -0.71
PCCB-213ENST00000475214 ALS2CLQ60I27 953 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 ANKS3Q6ZW76 656 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 OTOP2Q7RTS6 562 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 GPRIN1Q7Z2K8 1008 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 SCN4BQ8IWT1 228 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 MREGQ8N565 214 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 CCDC89Q8N998 374 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 FAM71BQ8TC56 605 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 NKD2Q969F2 451 aaPredicted RBP10.63□□□□□ -0.71
PCCB-213ENST00000475214 HAUS1Q96CS2 278 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 C8orf48Q96LL4 319 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 SLC9A7Q96T83 725 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 FMO2Q99518 471 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 FAM118BQ9BPY3 351 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 ZNF670Q9BS34 389 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 GPR62Q9BZJ7 368 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 DHX35Q9H5Z1 703 aaKnown RBP10.63□□□□□ -0.71
PCCB-213ENST00000475214 SLC28A3Q9HAS3 691 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 PRDM6Q9NQX0 595 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 TMEM30AQ9NV96 361 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 GPATCH2LQ9NWQ4 482 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 ABI2Q9NYB9 513 aaPredicted RBP10.63□□□□□ -0.71
PCCB-213ENST00000475214 WHRNQ9P202 907 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 FAM153AQ9UHL3 310 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 DNPEPQ9ULA0 475 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 HPCAL4Q9UM19 191 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 AP4E1Q9UPM8 1137 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 NAALADL1Q9UQQ1 740 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 USP3Q9Y6I4 520 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 NLRC5Q86WI3 1866 aa10.63□□□□□ -0.71
PCCB-213ENST00000475214 PTPRDP23468 1912 aa10.62□□□□□ -0.71
PCCB-213ENST00000475214 CARNS1A5YM72 827 aa10.62□□□□□ -0.71
PCCB-213ENST00000475214 SPDYE4A6NLX3 237 aa10.62□□□□□ -0.71
PCCB-213ENST00000475214 NT5C1B-RDH14C9J2C7 533 aa10.62□□□□□ -0.71
PCCB-213ENST00000475214 MCF2LO15068 1137 aa10.62□□□□□ -0.71
PCCB-213ENST00000475214 CPB1P15086 417 aa10.62□□□□□ -0.71
PCCB-213ENST00000475214 TGM2P21980 687 aa10.62□□□□□ -0.71
PCCB-213ENST00000475214 ECHS1P30084 290 aa10.62□□□□□ -0.71
PCCB-213ENST00000475214 HSPA9P38646 679 aaKnown RBP10.62□□□□□ -0.71
PCCB-213ENST00000475214 ADCY8P40145 1251 aa10.62□□□□□ -0.71
PCCB-213ENST00000475214 MAGEA11P43364 429 aa10.62□□□□□ -0.71
PCCB-213ENST00000475214 RPL21P46778 160 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms