RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 GRIA2P42262 883 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 PLA2G4AP47712 749 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 BCAT1P54687 386 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 MARSP56192 900 aaKnown RBP12.87□□□□□ -0.35
SSR1-205ENST00000475213 SLC8A3P57103 927 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 KDSRQ06136 332 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 PDE4CQ08493 712 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 SPEM2Q0P670 501 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 CETN1Q12798 172 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 KCNH2Q12809 1159 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 ANO4Q32M45 955 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 BTBD8Q5XKL5 378 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.87□□□□□ -0.35
SSR1-205ENST00000475213 TADA2BQ86TJ2 420 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 TRIM59Q8IWR1 403 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 FAM160A2Q8N612 972 aaPredicted RBP12.87□□□□□ -0.35
SSR1-205ENST00000475213 TRIML1Q8N9V2 468 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 CDK5RAP1Q96SZ6 601 aaKnown RBP12.87□□□□□ -0.35
SSR1-205ENST00000475213 SRRTQ9BXP5 876 aaKnown RBP12.87□□□□□ -0.35
SSR1-205ENST00000475213 PARD6AQ9NPB6 346 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 RYDENQ9NUL5 291 aaKnown RBP12.87□□□□□ -0.35
SSR1-205ENST00000475213 CLIC5Q9NZA1 410 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 KIAA1468Q9P260 1216 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 LSM7Q9UK45 103 aaKnown RBP12.87□□□□□ -0.35
SSR1-205ENST00000475213 MMP17Q9ULZ9 603 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 USP18Q9UMW8 372 aa12.87□□□□□ -0.35
SSR1-205ENST00000475213 O00370 1275 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 AXIN1O15169 862 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 TULP3O75386 442 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 STC2O76061 302 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 CCDC192P0DO97 292 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 TNFRSF4P43489 277 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 TKTL1P51854 596 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 MRPS21P82921 87 aaKnown RBP12.86□□□□□ -0.35
SSR1-205ENST00000475213 BST2Q10589 180 aaKnown RBP12.86□□□□□ -0.35
SSR1-205ENST00000475213 EMC10Q5UCC4 262 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 PM20D1Q6GTS8 502 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 TMEM270Q6UE05 265 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 Q6ZNB5 142 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 TPGS1Q6ZTW0 290 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 MIB1Q86YT6 1006 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 ARHGAP18Q8N392 663 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 PPM1KQ8N3J5 372 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 CCDC33Q8N5R6 958 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 IL17RCQ8NAC3 791 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 EHBP1Q8NDI1 1231 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 UBA3Q8TBC4 463 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 KAT5Q92993 513 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 HESX1Q9UBX0 185 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 EBF1Q9UH73 591 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 RASAL2Q9UJF2 1139 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 KIAA1257Q9ULG3 409 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 PCDHB4Q9Y5E5 795 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.86□□□□□ -0.35
SSR1-205ENST00000475213 THADAQ6YHU6 1953 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 CACNA1AO00555 2505 aa12.86□□□□□ -0.35
SSR1-205ENST00000475213 NUP205Q92621 2012 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 TBC1D3BA6NDS4 549 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 NEDD8-MDP1E9PL57 170 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 RNF225M0QZC1 329 aaPredicted RBP12.85□□□□□ -0.35
SSR1-205ENST00000475213 TRIM24O15164 1050 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 LRP3O75074 770 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 KLF8O95600 359 aaPredicted RBP12.85□□□□□ -0.35
SSR1-205ENST00000475213 FGFR1OPO95684 399 aaKnown RBP12.85□□□□□ -0.35
SSR1-205ENST00000475213 ZBED1O96006 694 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 AFPP02771 609 aaKnown RBP12.85□□□□□ -0.35
SSR1-205ENST00000475213 PAEPP09466 180 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 KIR2DL1P43626 348 aaPredicted RBP12.85□□□□□ -0.35
SSR1-205ENST00000475213 YWHAGP61981 247 aaKnown RBP eCLIP12.85□□□□□ -0.35
SSR1-205ENST00000475213 FOXK1P85037 733 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 EFEMP1Q12805 493 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 CRY1Q16526 586 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 RSPO4Q2I0M5 234 aaPredicted RBP12.85□□□□□ -0.35
SSR1-205ENST00000475213 PREPLQ4J6C6 727 aaPredicted RBP12.85□□□□□ -0.35
SSR1-205ENST00000475213 PKDCCQ504Y2 493 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 RRAGAQ7L523 313 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 BHLHA9Q7RTU4 235 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 CACNA2D4Q7Z3S7 1137 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 KBTBD6Q86V97 674 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 ARHGEF19Q8IW93 802 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 ALLCQ8N6M5 410 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 TXNDC5Q8NBS9 432 aaKnown RBP12.85□□□□□ -0.35
SSR1-205ENST00000475213 TSTD1Q8NFU3 115 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 TFAP2BQ92481 460 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 NDRG1Q92597 394 aaKnown RBP12.85□□□□□ -0.35
SSR1-205ENST00000475213 BBS2Q9BXC9 721 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 ULBP1Q9BZM6 244 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 LRRC4Q9HBW1 653 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 MARK1Q9P0L2 795 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 DEC1Q9P2X7 70 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 RWDD2AQ9UIY3 292 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 LAMA1P25391 3075 aa12.85□□□□□ -0.35
SSR1-205ENST00000475213 SGK1O00141 431 aa12.84□□□□□ -0.35
SSR1-205ENST00000475213 CACNG3O60359 315 aa12.84□□□□□ -0.35
SSR1-205ENST00000475213 CALCAP01258 141 aa12.84□□□□□ -0.35
SSR1-205ENST00000475213 KLKB1P03952 638 aa12.84□□□□□ -0.35
SSR1-205ENST00000475213 HMBSP08397 361 aa12.84□□□□□ -0.35
SSR1-205ENST00000475213 SETSIPP0DME0 302 aa12.84□□□□□ -0.35
SSR1-205ENST00000475213 TYRP14679 529 aa12.84□□□□□ -0.35
SSR1-205ENST00000475213 HNRNPLP14866 589 aaKnown RBP eCLIP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms