RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 SH3BP1Q9Y3L3 701 aa17.13■□□□□ 0.33
CPA4-205ENST00000474254 A0A1W2PQH9 124 aa17.12■□□□□ 0.33
CPA4-205ENST00000474254 K7EQS6 105 aa17.12■□□□□ 0.33
CPA4-205ENST00000474254 ADH1CP00326 375 aa17.12■□□□□ 0.33
CPA4-205ENST00000474254 APODP05090 189 aa17.12■□□□□ 0.33
CPA4-205ENST00000474254 PSEN1P49768 467 aa17.12■□□□□ 0.33
CPA4-205ENST00000474254 BCAT1P54687 386 aa17.12■□□□□ 0.33
CPA4-205ENST00000474254 MRPS21P82921 87 aaKnown RBP17.12■□□□□ 0.33
CPA4-205ENST00000474254 CETN1Q12798 172 aa17.12■□□□□ 0.33
CPA4-205ENST00000474254 GOLGA7BQ2TAP0 167 aa17.12■□□□□ 0.33
CPA4-205ENST00000474254 RAB41Q5JT25 222 aa17.12■□□□□ 0.33
CPA4-205ENST00000474254 DAB2IPQ5VWQ8 1189 aa17.12■□□□□ 0.33
CPA4-205ENST00000474254 PSAPL1Q6NUJ1 521 aa17.12■□□□□ 0.33
CPA4-205ENST00000474254 PIGZQ86VD9 579 aa17.12■□□□□ 0.33
CPA4-205ENST00000474254 ANKRD52Q8NB46 1076 aa17.12■□□□□ 0.33
CPA4-205ENST00000474254 PNKPQ96T60 521 aa17.12■□□□□ 0.33
CPA4-205ENST00000474254 SRRTQ9BXP5 876 aaKnown RBP17.12■□□□□ 0.33
CPA4-205ENST00000474254 UBXN6Q9BZV1 441 aa17.12■□□□□ 0.33
CPA4-205ENST00000474254 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.12■□□□□ 0.33
CPA4-205ENST00000474254 TSPAN16Q9UKR8 245 aa17.12■□□□□ 0.33
CPA4-205ENST00000474254 PLXND1Q9Y4D7 1925 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 KHNYNO15037 678 aaKnown RBP17.11■□□□□ 0.33
CPA4-205ENST00000474254 TBX18O95935 607 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 IRF1P10914 325 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 ADH5P11766 374 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 ATP5C1P36542 298 aaKnown RBP17.11■□□□□ 0.33
CPA4-205ENST00000474254 EIF2DP41214 584 aaKnown RBP17.11■□□□□ 0.33
CPA4-205ENST00000474254 DHPSP49366 369 aaPredicted RBP17.11■□□□□ 0.33
CPA4-205ENST00000474254 NOVA1P51513 510 aaKnown RBP17.11■□□□□ 0.33
CPA4-205ENST00000474254 SLC8A3P57103 927 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 KCNH2Q12809 1159 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 CRY1Q16526 586 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 SGO2Q562F6 1265 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 RHBDF2Q6PJF5 856 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 SCD5Q86SK9 330 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 RASSF3Q86WH2 238 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 BBS7Q8IWZ6 715 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 PPM1KQ8N3J5 372 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 ZNF276Q8N554 614 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 WBP2Q969T9 261 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 SPACA7Q96KW9 195 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 KLF16Q9BXK1 252 aaPredicted RBP17.11■□□□□ 0.33
CPA4-205ENST00000474254 CLSTN2Q9H4D0 955 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 POLMQ9NP87 494 aaPredicted RBP17.11■□□□□ 0.33
CPA4-205ENST00000474254 CLIC5Q9NZA1 410 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 BCCIPQ9P287 314 aaKnown RBP eCLIP17.11■□□□□ 0.33
CPA4-205ENST00000474254 RWDD2AQ9UIY3 292 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 NAGPAQ9UK23 515 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.11■□□□□ 0.33
CPA4-205ENST00000474254 LAMA1P25391 3075 aa17.11■□□□□ 0.33
CPA4-205ENST00000474254 C4orf47A7E2U8 309 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.1■□□□□ 0.33
CPA4-205ENST00000474254 O00370 1275 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 XPO1O14980 1071 aaKnown RBP17.1■□□□□ 0.33
CPA4-205ENST00000474254 GREM1O60565 184 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 KLF8O95600 359 aaPredicted RBP17.1■□□□□ 0.33
CPA4-205ENST00000474254 FGFR1OPO95684 399 aaKnown RBP17.1■□□□□ 0.33
CPA4-205ENST00000474254 AFPP02771 609 aaKnown RBP17.1■□□□□ 0.33
CPA4-205ENST00000474254 PAEPP09466 180 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 VDRP11473 427 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 RARGP13631 454 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 CD19P15391 556 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 TIE1P35590 1138 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 SHC2P98077 582 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 GCNT1Q02742 428 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 KDSRQ06136 332 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 GOLGA8FQ08AF8 430 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 GOLGA8DPQ0D2H9 430 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 BST2Q10589 180 aaKnown RBP17.1■□□□□ 0.33
CPA4-205ENST00000474254 HSF5Q4G112 596 aaPredicted RBP17.1■□□□□ 0.33
CPA4-205ENST00000474254 LY6G5CQ5SRR4 150 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 TMEM270Q6UE05 265 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 CLEC17AQ6ZS10 378 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 C12orf40Q86WS4 652 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 ABCA7Q8IZY2 2146 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 TXNDC5Q8NBS9 432 aaKnown RBP17.1■□□□□ 0.33
CPA4-205ENST00000474254 MDGA1Q8NFP4 955 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 KAT5Q92993 513 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 TMEM9BQ9NQ34 198 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 ARHGEF4Q9NR80 690 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 HESX1Q9UBX0 185 aa17.1■□□□□ 0.33
CPA4-205ENST00000474254 LNP1A1A4G5 178 aa17.09■□□□□ 0.33
CPA4-205ENST00000474254 TULP2O00295 520 aa17.09■□□□□ 0.33
CPA4-205ENST00000474254 MDM4O15151 490 aa17.09■□□□□ 0.33
CPA4-205ENST00000474254 HOXC11O43248 304 aaPredicted RBP17.09■□□□□ 0.33
CPA4-205ENST00000474254 MAP3K13O43283 966 aa17.09■□□□□ 0.33
CPA4-205ENST00000474254 KAT7O95251 611 aa17.09■□□□□ 0.33
CPA4-205ENST00000474254 BCKDHBP21953 392 aa17.09■□□□□ 0.33
CPA4-205ENST00000474254 SLC6A11P48066 632 aa17.09■□□□□ 0.33
CPA4-205ENST00000474254 PDE4CQ08493 712 aa17.09■□□□□ 0.33
CPA4-205ENST00000474254 EOGTQ5NDL2 527 aa17.09■□□□□ 0.33
CPA4-205ENST00000474254 C10orf120Q5SQS8 335 aa17.09■□□□□ 0.33
CPA4-205ENST00000474254 BTBD8Q5XKL5 378 aa17.09■□□□□ 0.33
CPA4-205ENST00000474254 HTR3DQ70Z44 454 aa17.09■□□□□ 0.33
CPA4-205ENST00000474254 TADA2BQ86TJ2 420 aa17.09■□□□□ 0.33
CPA4-205ENST00000474254 ARHGEF19Q8IW93 802 aa17.09■□□□□ 0.33
CPA4-205ENST00000474254 ALLCQ8N6M5 410 aa17.09■□□□□ 0.33
CPA4-205ENST00000474254 MED15Q96RN5 788 aa17.09■□□□□ 0.33
CPA4-205ENST00000474254 CDK5RAP1Q96SZ6 601 aaKnown RBP17.09■□□□□ 0.33
CPA4-205ENST00000474254 SPHK2Q9NRA0 654 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms