RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ENOSF1Q7L5Y1 443 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 BHLHA9Q7RTU4 235 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 ETFBKMTQ8IXQ9 262 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 SIX6OS1Q8N1H7 587 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 SCML4Q8N228 414 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 DCLK2Q8N568 766 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 NAT16Q8N8M0 369 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 NDRG1Q92597 394 aaKnown RBP11.73□□□□□ -0.53
CKS1B-206ENST00000474215 SECISBP2LQ93073 1101 aaKnown RBP11.73□□□□□ -0.53
CKS1B-206ENST00000474215 FAM81BQ96LP2 452 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 GBP4Q96PP9 640 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 HINFPQ9BQA5 517 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 DCLK3Q9C098 648 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 CNGB3Q9NQW8 809 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 POLR3BQ9NW08 1133 aaPredicted RBP11.73□□□□□ -0.53
CKS1B-206ENST00000474215 WDR35Q9P2L0 1181 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 DEC1Q9P2X7 70 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 NCDNQ9UBB6 729 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 RASAL2Q9UJF2 1139 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 RAB23Q9ULC3 237 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 STRIP2Q9ULQ0 834 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 ZNF510Q9Y2H8 683 aa11.73□□□□□ -0.53
CKS1B-206ENST00000474215 FANCMQ8IYD8 2048 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 GTPBP10A4D1E9 387 aaKnown RBP11.72□□□□□ -0.53
CKS1B-206ENST00000474215 TBC1D3BA6NDS4 549 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 ANTXRLA6NF34 631 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 YJEFN3A6XGL0 299 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 E7ENQ6 273 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 M0QYV0 167 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 GABBR2O75899 941 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 HMBSP08397 361 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 LCP1P13796 627 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 RGS7P49802 495 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 MRPS21P82921 87 aaKnown RBP11.72□□□□□ -0.53
CKS1B-206ENST00000474215 KDSRQ06136 332 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 SRSF5Q13243 272 aaKnown RBP11.72□□□□□ -0.53
CKS1B-206ENST00000474215 EXOC3L4Q17RC7 722 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 CT47A1Q5JQC4 288 aaPredicted RBP11.72□□□□□ -0.53
CKS1B-206ENST00000474215 EMC10Q5UCC4 262 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 BSPRYQ5W0U4 402 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 TPGS1Q6ZTW0 290 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 NUDT18Q6ZVK8 323 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 FAM114A1Q8IWE2 563 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 SFTPA1Q8IWL2 248 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 PHTF2Q8N3S3 785 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 CCDC33Q8N5R6 958 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 HSFY1Q96LI6 401 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 BBS2Q9BXC9 721 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 ABCC13Q9NSE7 274 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 OLA1Q9NTK5 396 aaKnown RBP11.72□□□□□ -0.53
CKS1B-206ENST00000474215 MARK1Q9P0L2 795 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 RIF1Q5UIP0 2472 aaKnown RBP11.72□□□□□ -0.53
CKS1B-206ENST00000474215 MYH10P35580 1976 aa11.72□□□□□ -0.53
CKS1B-206ENST00000474215 DMDP11532 3685 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 SLC12A8A0AV02 714 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 NEDD8-MDP1E9PL57 170 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 MED7O43513 233 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 CACNG3O60359 315 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 APBB3O95704 486 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 TYRP14679 529 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 PON1P27169 355 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 CHKAP35790 457 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 KIR2DL1P43626 348 aaPredicted RBP11.71□□□□□ -0.53
CKS1B-206ENST00000474215 DAOAP59103 153 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 LPAL2Q16609 132 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 MAN2A1Q16706 1144 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 LAIR1Q6GTX8 287 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 GJB7Q6PEY0 223 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 PRR23BQ6ZRT6 265 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 CEP68Q76N32 757 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 KIAA2013Q8IYS2 634 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 ALLCQ8N6M5 410 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 GPR161Q8N6U8 529 aaKnown RBP11.71□□□□□ -0.53
CKS1B-206ENST00000474215 IL17RCQ8NAC3 791 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 GPT2Q8TD30 523 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 KCNV2Q8TDN2 545 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 RNF139Q8WU17 664 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 GAB3Q8WWW8 586 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 ZNF606Q8WXB4 792 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 IRGQQ8WZA9 623 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 EDEM1Q92611 657 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 XPO6Q96QU8 1125 aaKnown RBP11.71□□□□□ -0.53
CKS1B-206ENST00000474215 HHIPQ96QV1 700 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 TUBGCP2Q9BSJ2 902 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 APEX2Q9UBZ4 518 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 EBF1Q9UH73 591 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 AGO1Q9UL18 857 aaKnown RBP11.71□□□□□ -0.53
CKS1B-206ENST00000474215 MMP17Q9ULZ9 603 aa11.71□□□□□ -0.53
CKS1B-206ENST00000474215 PTPRZ1P23471 2315 aaPredicted RBP11.71□□□□□ -0.54
CKS1B-206ENST00000474215 GOLGA6L22H0YM25 854 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 PIK3R2O00459 728 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 TRIM24O15164 1050 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 AXIN1O15169 862 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 RPP40O75818 363 aaKnown RBP11.7□□□□□ -0.54
CKS1B-206ENST00000474215 FBXO21O94952 628 aa11.7□□□□□ -0.54
CKS1B-206ENST00000474215 LETM1O95202 739 aaPredicted RBP11.7□□□□□ -0.54
CKS1B-206ENST00000474215 KLF8O95600 359 aaPredicted RBP11.7□□□□□ -0.54
CKS1B-206ENST00000474215 CHRM1P11229 460 aaPredicted RBP11.7□□□□□ -0.54
CKS1B-206ENST00000474215 CORO1AP31146 461 aaKnown RBP11.7□□□□□ -0.54
CKS1B-206ENST00000474215 TIE1P35590 1138 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms