RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 LARSQ9P2J5 1176 aaKnown RBP11.18□□□□□ -0.62
SSBP1-209ENST00000473783 WDR35Q9P2L0 1181 aa11.18□□□□□ -0.62
SSBP1-209ENST00000473783 SEPT3Q9UH03 358 aa11.18□□□□□ -0.62
SSBP1-209ENST00000473783 CYP46A1Q9Y6A2 500 aa11.18□□□□□ -0.62
SSBP1-209ENST00000473783 VILLO15195 856 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 COCHO43405 550 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 SYNCRIPO60506 623 aaKnown RBP11.17□□□□□ -0.62
SSBP1-209ENST00000473783 CKMT2P17540 419 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 BDNFP23560 247 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 ACOT2P49753 483 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 COPAP53621 1224 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 C21orf59P57076 290 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 INSM1Q01101 510 aaPredicted RBP11.17□□□□□ -0.62
SSBP1-209ENST00000473783 GRIN1Q05586 938 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 E2F5Q15329 346 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 TDRD10Q5VZ19 366 aaKnown RBP11.17□□□□□ -0.62
SSBP1-209ENST00000473783 KDM7AQ6ZMT4 941 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 OSTM1Q86WC4 334 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 ADGRF2Q8IZF7 708 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 EID2Q8N6I1 236 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 TOP6BLQ8N6T0 577 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 PDZD8Q8NEN9 1154 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 SAP25Q8TEE9 199 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 OVCA2Q8WZ82 227 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 MYLPFQ96A32 169 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 BIRC7Q96CA5 298 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 ACE2Q9BYF1 805 aaPredicted RBP11.17□□□□□ -0.62
SSBP1-209ENST00000473783 STARD5Q9NSY2 213 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 GDAP2Q9NXN4 497 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 KCNK4Q9NYG8 393 aa11.17□□□□□ -0.62
SSBP1-209ENST00000473783 SUV39H1O43463 412 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 TSPAN3O60637 253 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 CDC45O75419 566 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 CISD3P0C7P0 127 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 CR2P20023 1033 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 ACO1P21399 889 aaKnown RBP11.16□□□□□ -0.62
SSBP1-209ENST00000473783 ACSL1P33121 698 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 TUBP50607 506 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 RACK1P63244 317 aaKnown RBP11.16□□□□□ -0.62
SSBP1-209ENST00000473783 E2F1Q01094 437 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 RAD51AP2Q09MP3 1159 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 C4orf17Q53FE4 359 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 FAM124AQ86V42 546 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 LRRC52Q8N7C0 313 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 SKA1Q96BD8 255 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 C8orf48Q96LL4 319 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 SYT15Q9BQS2 421 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 RAB34Q9BZG1 259 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.16□□□□□ -0.62
SSBP1-209ENST00000473783 THSD1Q9NS62 852 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 KCND2Q9NZV8 630 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 THAP10Q9P2Z0 257 aaPredicted RBP11.16□□□□□ -0.62
SSBP1-209ENST00000473783 CDH9Q9ULB4 789 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 BSNQ9UPA5 3926 aa11.16□□□□□ -0.62
SSBP1-209ENST00000473783 ITPR2Q14571 2701 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 F8VP50 259 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 HCRTO43612 131 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 ATP2C2O75185 946 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 IL18RAPO95256 599 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 CTDNEP1O95476 244 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 SEMA4FO95754 770 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 MT-CO3P00414 261 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 ITGB3P05106 788 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 MPOP05164 745 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 FDPSP14324 419 aaKnown RBP11.15□□□□□ -0.62
SSBP1-209ENST00000473783 ACP1P24666 158 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 EPHA8P29322 1005 aaPredicted RBP11.15□□□□□ -0.62
SSBP1-209ENST00000473783 POLR2BP30876 1174 aaKnown RBP11.15□□□□□ -0.62
SSBP1-209ENST00000473783 LSSP48449 732 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 BCAT1P54687 386 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 CDH8P55286 799 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 GABREP78334 506 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 CYP27A1Q02318 531 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 SHBQ15464 509 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 HECTD3Q5T447 861 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 SLC39A4Q6P5W5 647 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 HTR3DQ70Z44 454 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 DPH6Q7L8W6 267 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 CACUL1Q86Y37 369 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 IGSF22Q8N9C0 903 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 EXD3Q8N9H8 876 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 UCMAQ8WVF2 138 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 MMS19Q96T76 1030 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 TRIM9Q9C026 710 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 POLR1BQ9H9Y6 1135 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 CRTAC1Q9NQ79 661 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 AGAP1Q9UPQ3 857 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 SLC27A6Q9Y2P4 619 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 PCDHB1Q9Y5F3 818 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 SNX9Q9Y5X1 595 aa11.15□□□□□ -0.62
SSBP1-209ENST00000473783 RELNP78509 3460 aa11.15□□□□□ -0.63
SSBP1-209ENST00000473783 PTPRJQ12913 1337 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 PFKFB2O60825 505 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 DTNBO60941 627 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 C7P10643 843 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 YWHAQP27348 245 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 CCR10P46092 362 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 ARRB1P49407 418 aaPredicted RBP11.14□□□□□ -0.63
SSBP1-209ENST00000473783 PSMC1P62191 440 aaKnown RBP11.14□□□□□ -0.63
SSBP1-209ENST00000473783 ASIC1P78348 528 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms