RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 SCD5Q86SK9 330 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 SPATA4Q8NEY3 305 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 EXD1Q8NHP7 514 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 SPPL3Q8TCT6 385 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 RAPGEF5Q92565 580 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 TSC1Q92574 1164 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 HSPH1Q92598 858 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 CENPIQ92674 756 aaPredicted RBP11.21□□□□□ -0.61
SP140-208ENST00000473711 SPATA17Q96L03 361 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 PEBP4Q96S96 227 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 NPY6RQ99463 290 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 NCAPGQ9BPX3 1015 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 AP1M1Q9BXS5 423 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 FBXO44Q9H4M3 255 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 NMUR1Q9HB89 426 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 CYP4F11Q9HBI6 524 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 RXFP1Q9HBX9 757 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.21□□□□□ -0.61
SP140-208ENST00000473711 IL37Q9NZH6 218 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 COX16Q9P0S2 106 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 FNIP2Q9P278 1114 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 STK39Q9UEW8 545 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 MTUS1Q9ULD2 1270 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 TTC7AQ9ULT0 858 aaPredicted RBP11.21□□□□□ -0.61
SP140-208ENST00000473711 STAP1Q9ULZ2 295 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 SCML2Q9UQR0 700 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 SSX2IPQ9Y2D8 614 aa11.21□□□□□ -0.61
SP140-208ENST00000473711 TCRBV7S2A1N4TA0A589 114 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 LRRD1A4D1F6 860 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 EFCAB8A8MWE9 144 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 KRIT1O00522 736 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 TEX28O15482 410 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 ENDOD1O94919 500 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 RTN3O95197 1032 aaPredicted RBP11.2□□□□□ -0.62
SP140-208ENST00000473711 CA3P07451 260 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 CNPP09543 421 aaKnown RBP11.2□□□□□ -0.62
SP140-208ENST00000473711 SPATA31D3P0C874 917 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 ATF2P15336 505 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 ATF6P18850 670 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 KDELR1P24390 212 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 ELF1P32519 619 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 CETN2P41208 172 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 TERF1P54274 439 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 CREMQ03060 361 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 DEUP1Q05D60 604 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 NME3Q13232 169 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 ERCC6LQ2NKX8 1250 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 BOLA3Q53S33 107 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 MFSD7Q6UXD7 560 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 SPATA31D4Q6ZUB0 917 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 RSRC2Q7L4I2 434 aaKnown RBP11.2□□□□□ -0.62
SP140-208ENST00000473711 STRADAQ7RTN6 431 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 POLNQ7Z5Q5 900 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 ANKS1BQ7Z6G8 1248 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 SLC13A5Q86YT5 568 aaPredicted RBP11.2□□□□□ -0.62
SP140-208ENST00000473711 GPR65Q8IYL9 337 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 NOA1Q8NC60 698 aaKnown RBP11.2□□□□□ -0.62
SP140-208ENST00000473711 KCTD6Q8NC69 237 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 SLC7A14Q8TBB6 771 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 ADAM32Q8TC27 787 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 POF1BQ8WVV4 589 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 UBXN4Q92575 508 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 FBXO32Q969P5 355 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 NT5C3BQ969T7 300 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 RBM41Q96IZ5 413 aaKnown RBP11.2□□□□□ -0.62
SP140-208ENST00000473711 RPGRIP1Q96KN7 1286 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 KLHL5Q96PQ7 755 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 SLITRK1Q96PX8 696 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 TCF25Q9BQ70 676 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 PLVAPQ9BX97 442 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 HEMGNQ9BXL5 484 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 UBE2OQ9C0C9 1292 aaKnown RBP11.2□□□□□ -0.62
SP140-208ENST00000473711 ENTPD7Q9NQZ7 604 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 ABCC13Q9NSE7 274 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 RBM12Q9NTZ6 932 aaKnown RBP11.2□□□□□ -0.62
SP140-208ENST00000473711 GPATCH2LQ9NWQ4 482 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 COMMD8Q9NX08 183 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 GMIPQ9P107 970 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 CALCOCO1Q9P1Z2 691 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 MAGED2Q9UNF1 606 aaPredicted RBP11.2□□□□□ -0.62
SP140-208ENST00000473711 RWDD3Q9Y3V2 267 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 NR2E1Q9Y466 385 aa11.2□□□□□ -0.62
SP140-208ENST00000473711 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.19□□□□□ -0.62
SP140-208ENST00000473711 PRRG1O14668 218 aa11.19□□□□□ -0.62
SP140-208ENST00000473711 FSCN2O14926 492 aa11.19□□□□□ -0.62
SP140-208ENST00000473711 CTIFO43310 598 aaKnown RBP11.19□□□□□ -0.62
SP140-208ENST00000473711 MAP3K7O43318 606 aa11.19□□□□□ -0.62
SP140-208ENST00000473711 RALAP11233 206 aa11.19□□□□□ -0.62
SP140-208ENST00000473711 KRT10P13645 584 aa11.19□□□□□ -0.62
SP140-208ENST00000473711 DNAJB1P25685 340 aa11.19□□□□□ -0.62
SP140-208ENST00000473711 GTF2F1P35269 517 aaKnown RBP eCLIP11.19□□□□□ -0.62
SP140-208ENST00000473711 ALDH1A3P47895 512 aa11.19□□□□□ -0.62
SP140-208ENST00000473711 TAF10Q12962 218 aa11.19□□□□□ -0.62
SP140-208ENST00000473711 ZC3H12AQ5D1E8 599 aaKnown RBP11.19□□□□□ -0.62
SP140-208ENST00000473711 OTUD1Q5VV17 481 aaPredicted RBP11.19□□□□□ -0.62
SP140-208ENST00000473711 PLPP4Q5VZY2 271 aa11.19□□□□□ -0.62
SP140-208ENST00000473711 KAZNQ674X7 775 aa11.19□□□□□ -0.62
SP140-208ENST00000473711 SPOCD1Q6ZMY3 1216 aa11.19□□□□□ -0.62
SP140-208ENST00000473711 CYP4V2Q6ZWL3 525 aaPredicted RBP11.19□□□□□ -0.62
SP140-208ENST00000473711 MON1AQ86VX9 555 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms