RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 HUS1O60921 280 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 CSDE1O75534 798 aaKnown RBP7.95□□□□□ -1.14
CCDC171-205ENST00000472806 ENDOD1O94919 500 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 FSBPO95073 299 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 CELF2O95319 508 aaKnown RBP7.95□□□□□ -1.14
CCDC171-205ENST00000472806 GSTA2P09210 222 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 RBP3P10745 1247 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 TCF4P15884 667 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 PAX3P23760 479 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 IL1R2P27930 398 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 HOXA11P31270 313 aaPredicted RBP7.95□□□□□ -1.14
CCDC171-205ENST00000472806 STX2P32856 288 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 ATP5OP48047 213 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 INHBEP58166 350 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 PDIA2Q13087 525 aaKnown RBP7.95□□□□□ -1.14
CCDC171-205ENST00000472806 NOMO1Q15155 1222 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 TMED2Q15363 201 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 DBN1Q16643 649 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 SMTNL2Q2TAL5 461 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 TTC31Q49AM3 519 aaPredicted RBP7.95□□□□□ -1.14
CCDC171-205ENST00000472806 XKR4Q5GH76 650 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 EFHC1Q5JVL4 640 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 SCARA3Q6AZY7 606 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 TXNRD3NBQ6F5E7 133 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 CYP4F22Q6NT55 531 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 C6orf89Q6UWU4 347 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 ALKAL1Q6UXT8 129 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 PSTKQ8IV42 348 aaKnown RBP7.95□□□□□ -1.14
CCDC171-205ENST00000472806 PALM2Q8IXS6 379 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 ZBED8Q8IZ13 594 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 CRYBG2Q8N1P7 616 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 MICALL1Q8N3F8 863 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 TOP6BLQ8N6T0 577 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 EMC1Q8N766 993 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 GBP7Q8N8V2 638 aaPredicted RBP7.95□□□□□ -1.14
CCDC171-205ENST00000472806 NAT8LQ8N9F0 302 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 ANKRD52Q8NB46 1076 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 APPL2Q8NEU8 664 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 MDM1Q8TC05 714 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 SPATA18Q8TC71 538 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 CKAP2Q8WWK9 683 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 PRCCQ92733 491 aaPredicted RBP7.95□□□□□ -1.14
CCDC171-205ENST00000472806 ALKBH8Q96BT7 664 aaKnown RBP7.95□□□□□ -1.14
CCDC171-205ENST00000472806 ZNF837Q96EG3 531 aaPredicted RBP7.95□□□□□ -1.14
CCDC171-205ENST00000472806 C9orf72Q96LT7 481 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 ZNF317Q96PQ6 595 aaPredicted RBP7.95□□□□□ -1.14
CCDC171-205ENST00000472806 RNF157Q96PX1 679 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 SMC6Q96SB8 1091 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 OSMRQ99650 979 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 PRMT1Q99873 361 aaKnown RBP7.95□□□□□ -1.14
CCDC171-205ENST00000472806 FAM118BQ9BPY3 351 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 ADAM7Q9H2U9 754 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 SSU72Q9NP77 194 aaKnown RBP7.95□□□□□ -1.14
CCDC171-205ENST00000472806 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.95□□□□□ -1.14
CCDC171-205ENST00000472806 SLC38A7Q9NVC3 462 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 PSMC3IPQ9P2W1 217 aaPredicted RBP7.95□□□□□ -1.14
CCDC171-205ENST00000472806 HMGXB4Q9UGU5 601 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 NAALADL1Q9UQQ1 740 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 PIN4Q9Y237 131 aaKnown RBP7.95□□□□□ -1.14
CCDC171-205ENST00000472806 GINS2Q9Y248 185 aa7.95□□□□□ -1.14
CCDC171-205ENST00000472806 BCLAF3A2AJT9 711 aaKnown RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 FAM47DPA6NHR8 397 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 KPNA7A9QM74 516 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 RASA4BC9J798 803 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 E7ESA3 106 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 MEN1O00255 615 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 PIRO00625 290 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 PRPF4O43172 522 aaKnown RBP eCLIP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 RASA4O43374 803 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 RECQL4O94761 1208 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 SUN1O94901 812 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 ZBED1O96006 694 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 GSTA1P08263 222 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 MYL3P08590 195 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 KRT15P19012 456 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 WARSP23381 471 aaKnown RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 RPL22P35268 128 aaKnown RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 GNL1P36915 607 aaPredicted RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 NR2C2P49116 596 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 RNF144AP50876 292 aaPredicted RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 BCAR1P56945 870 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 GEMIN4P57678 1058 aaKnown RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 BASP1P80723 227 aaKnown RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 SLC20A2Q08357 652 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 IFT88Q13099 833 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 ORC1Q13415 861 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 XRCC4Q13426 336 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 DPYSL3Q14195 570 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 SPARCL1Q14515 664 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 SNX17Q15036 470 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 TAF1CQ15572 869 aaPredicted RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 SEPT7Q16181 437 aaKnown RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 CCDC14Q49A88 953 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 CCDC38Q502W7 563 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 LACTB2Q53H82 288 aaPredicted RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 ZC3H12AQ5D1E8 599 aaKnown RBP7.94□□□□□ -1.14
CCDC171-205ENST00000472806 KCNT1Q5JUK3 1230 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 SCYL2Q6P3W7 929 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 OLFML1Q6UWY5 402 aa7.94□□□□□ -1.14
CCDC171-205ENST00000472806 SLC26A9Q7LBE3 791 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms