RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 FOXF2Q12947 444 aa7.97□□□□□ -1.13
SGCE-210ENST00000472326 CEP78Q5JTW2 689 aa7.97□□□□□ -1.13
SGCE-210ENST00000472326 TMTC4Q5T4D3 741 aa7.97□□□□□ -1.13
SGCE-210ENST00000472326 SRRM1Q8IYB3 904 aaKnown RBP7.97□□□□□ -1.13
SGCE-210ENST00000472326 C12orf76Q8N812 135 aaPredicted RBP7.97□□□□□ -1.13
SGCE-210ENST00000472326 PNPLA1Q8N8W4 532 aa7.97□□□□□ -1.13
SGCE-210ENST00000472326 NGDNQ8NEJ9 315 aaKnown RBP7.97□□□□□ -1.13
SGCE-210ENST00000472326 ADAMTS18Q8TE60 1221 aa7.97□□□□□ -1.13
SGCE-210ENST00000472326 GJA10Q969M2 543 aa7.97□□□□□ -1.13
SGCE-210ENST00000472326 EDC3Q96F86 508 aaKnown RBP7.97□□□□□ -1.13
SGCE-210ENST00000472326 CCDC17Q96LX7 622 aa7.97□□□□□ -1.13
SGCE-210ENST00000472326 HS6ST2Q96MM7 605 aa7.97□□□□□ -1.13
SGCE-210ENST00000472326 FYTTD1Q96QD9 318 aaKnown RBP7.97□□□□□ -1.13
SGCE-210ENST00000472326 WDR24Q96S15 920 aa7.97□□□□□ -1.13
SGCE-210ENST00000472326 SAP30LQ9HAJ7 183 aa7.97□□□□□ -1.13
SGCE-210ENST00000472326 UBE2Q2LH0YL09 131 aa7.96□□□□□ -1.14
SGCE-210ENST00000472326 ZSCAN9O15535 394 aaPredicted RBP7.96□□□□□ -1.14
SGCE-210ENST00000472326 CBFA2T3O75081 653 aa7.96□□□□□ -1.14
SGCE-210ENST00000472326 CYP2A6P11509 494 aaPredicted RBP7.96□□□□□ -1.14
SGCE-210ENST00000472326 GPC5P78333 572 aa7.96□□□□□ -1.14
SGCE-210ENST00000472326 TXNL4AP83876 142 aaKnown RBP7.96□□□□□ -1.14
SGCE-210ENST00000472326 SLC5A9Q2M3M2 681 aa7.96□□□□□ -1.14
SGCE-210ENST00000472326 CERKLQ49MI3 558 aaPredicted RBP7.96□□□□□ -1.14
SGCE-210ENST00000472326 AASDHQ4L235 1098 aaPredicted RBP7.96□□□□□ -1.14
SGCE-210ENST00000472326 DCDC5Q6ZRR9 648 aa7.96□□□□□ -1.14
SGCE-210ENST00000472326 DEPTORQ8TB45 409 aa7.96□□□□□ -1.14
SGCE-210ENST00000472326 GRAMD1AQ96CP6 724 aa7.96□□□□□ -1.14
SGCE-210ENST00000472326 EIF2AQ9BY44 585 aaKnown RBP7.96□□□□□ -1.14
SGCE-210ENST00000472326 NLRC4Q9NPP4 1024 aa7.96□□□□□ -1.14
SGCE-210ENST00000472326 PDGFCQ9NRA1 345 aa7.96□□□□□ -1.14
SGCE-210ENST00000472326 VPS45Q9NRW7 570 aa7.96□□□□□ -1.14
SGCE-210ENST00000472326 FLRT1Q9NZU1 646 aa7.96□□□□□ -1.14
SGCE-210ENST00000472326 PCDHB2Q9Y5E7 798 aa7.96□□□□□ -1.14
SGCE-210ENST00000472326 FNDC1Q4ZHG4 1894 aaPredicted RBP7.96□□□□□ -1.14
SGCE-210ENST00000472326 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.95□□□□□ -1.14
SGCE-210ENST00000472326 CELA2AP08217 269 aa7.95□□□□□ -1.14
SGCE-210ENST00000472326 ATF7P17544 494 aaPredicted RBP7.95□□□□□ -1.14
SGCE-210ENST00000472326 SERPINB3P29508 390 aa7.95□□□□□ -1.14
SGCE-210ENST00000472326 SLC5A2P31639 672 aa7.95□□□□□ -1.14
SGCE-210ENST00000472326 ABCG1P45844 678 aa7.95□□□□□ -1.14
SGCE-210ENST00000472326 CFHR3Q02985 330 aa7.95□□□□□ -1.14
SGCE-210ENST00000472326 MFSD13AQ14CX5 517 aa7.95□□□□□ -1.14
SGCE-210ENST00000472326 FAM71DQ8N9W8 422 aa7.95□□□□□ -1.14
SGCE-210ENST00000472326 C8orf58Q8NAV2 365 aa7.95□□□□□ -1.14
SGCE-210ENST00000472326 VOPP1Q96AW1 172 aa7.95□□□□□ -1.14
SGCE-210ENST00000472326 EFHD1Q9BUP0 239 aa7.95□□□□□ -1.14
SGCE-210ENST00000472326 QTRT1Q9BXR0 403 aaKnown RBP7.95□□□□□ -1.14
SGCE-210ENST00000472326 PCGF6Q9BYE7 350 aa7.95□□□□□ -1.14
SGCE-210ENST00000472326 CDC23Q9UJX2 597 aa7.95□□□□□ -1.14
SGCE-210ENST00000472326 VPS4AQ9UN37 437 aa7.95□□□□□ -1.14
SGCE-210ENST00000472326 CLIC1O00299 241 aa7.94□□□□□ -1.14
SGCE-210ENST00000472326 ADAMTS3O15072 1205 aa7.94□□□□□ -1.14
SGCE-210ENST00000472326 FYB1O15117 783 aa7.94□□□□□ -1.14
SGCE-210ENST00000472326 USP1O94782 785 aa7.94□□□□□ -1.14
SGCE-210ENST00000472326 CHRM5P08912 532 aaPredicted RBP7.94□□□□□ -1.14
SGCE-210ENST00000472326 SRGAP2BP0DMP2 458 aa7.94□□□□□ -1.14
SGCE-210ENST00000472326 EPHB2P29323 1055 aa7.94□□□□□ -1.14
SGCE-210ENST00000472326 BFSP2Q13515 415 aa7.94□□□□□ -1.14
SGCE-210ENST00000472326 KCNB1Q14721 858 aa7.94□□□□□ -1.14
SGCE-210ENST00000472326 LARS2Q15031 903 aaKnown RBP7.94□□□□□ -1.14
SGCE-210ENST00000472326 MAPKAPK3Q16644 382 aa7.94□□□□□ -1.14
SGCE-210ENST00000472326 TMEM196Q5HYL7 178 aa7.94□□□□□ -1.14
SGCE-210ENST00000472326 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.94□□□□□ -1.14
SGCE-210ENST00000472326 IPO4Q8TEX9 1081 aaKnown RBP7.94□□□□□ -1.14
SGCE-210ENST00000472326 CCDC194A0A1B0GVG4 234 aa7.93□□□□□ -1.14
SGCE-210ENST00000472326 BTBD19C9JJ37 291 aa7.93□□□□□ -1.14
SGCE-210ENST00000472326 PLA2G6O60733 806 aa7.93□□□□□ -1.14
SGCE-210ENST00000472326 GALNSP34059 522 aa7.93□□□□□ -1.14
SGCE-210ENST00000472326 CCDC15Q0P6D6 951 aa7.93□□□□□ -1.14
SGCE-210ENST00000472326 ATP1A4Q13733 1029 aa7.93□□□□□ -1.14
SGCE-210ENST00000472326 RAB30Q15771 203 aa7.93□□□□□ -1.14
SGCE-210ENST00000472326 ACRBPQ8NEB7 543 aa7.93□□□□□ -1.14
SGCE-210ENST00000472326 KAZALD1Q96I82 304 aa7.93□□□□□ -1.14
SGCE-210ENST00000472326 TMEM8AQ9HCN3 771 aa7.93□□□□□ -1.14
SGCE-210ENST00000472326 SLC39A10Q9ULF5 831 aa7.93□□□□□ -1.14
SGCE-210ENST00000472326 OR2W5A6NFC9 320 aa7.92□□□□□ -1.14
SGCE-210ENST00000472326 TMEM232C9JQI7 657 aa7.92□□□□□ -1.14
SGCE-210ENST00000472326 PPP6CO00743 305 aa7.92□□□□□ -1.14
SGCE-210ENST00000472326 MBPP02686 304 aaPredicted RBP7.92□□□□□ -1.14
SGCE-210ENST00000472326 TMIGD3P0DMS9 266 aaPredicted RBP7.92□□□□□ -1.14
SGCE-210ENST00000472326 RAE1P78406 368 aaKnown RBP7.92□□□□□ -1.14
SGCE-210ENST00000472326 NSUN2Q08J23 767 aaKnown RBP eCLIP7.92□□□□□ -1.14
SGCE-210ENST00000472326 DNASE1L3Q13609 305 aa7.92□□□□□ -1.14
SGCE-210ENST00000472326 KCNJ12Q14500 433 aa7.92□□□□□ -1.14
SGCE-210ENST00000472326 SRSF7Q16629 238 aaKnown RBP eCLIP7.92□□□□□ -1.14
SGCE-210ENST00000472326 P3H1Q32P28 736 aa7.92□□□□□ -1.14
SGCE-210ENST00000472326 SUPT20HL1Q3ZLR7 823 aa7.92□□□□□ -1.14
SGCE-210ENST00000472326 DGKKQ5KSL6 1271 aa7.92□□□□□ -1.14
SGCE-210ENST00000472326 YTHDF3Q7Z739 585 aaKnown RBP7.92□□□□□ -1.14
SGCE-210ENST00000472326 KRT73Q86Y46 540 aa7.92□□□□□ -1.14
SGCE-210ENST00000472326 MUL1Q969V5 352 aa7.92□□□□□ -1.14
SGCE-210ENST00000472326 CINPQ9BW66 212 aaPredicted RBP7.92□□□□□ -1.14
SGCE-210ENST00000472326 KLHL13Q9P2N7 655 aa7.92□□□□□ -1.14
SGCE-210ENST00000472326 FZD4Q9ULV1 537 aa7.92□□□□□ -1.14
SGCE-210ENST00000472326 H3BNC9 293 aa7.91□□□□□ -1.14
SGCE-210ENST00000472326 VIPP01282 170 aa7.91□□□□□ -1.14
SGCE-210ENST00000472326 PPM1AP35813 382 aa7.91□□□□□ -1.14
SGCE-210ENST00000472326 DGKQP52824 942 aa7.91□□□□□ -1.14
SGCE-210ENST00000472326 SLC14A1Q13336 389 aa7.91□□□□□ -1.14
SGCE-210ENST00000472326 SEC23BQ15437 767 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms