RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 PRKAB2O43741 272 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 CBFA2T3O75081 653 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 PRDM1O75626 825 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 FAM155BO75949 473 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 ITGB3P05106 788 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 GNAI3P08754 354 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 CEBPBP17676 345 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 BCKDHBP21953 392 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 TMOD1P28289 359 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 MATKP42679 507 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 PTGER3P43115 390 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 GRK6P43250 576 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 SLC26A2P50443 739 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 SP2Q02086 613 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 SLC9A5Q14940 896 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 PGM5Q15124 567 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 PLCB4Q15147 1175 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 ITPRIPL2Q3MIP1 535 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 SBK1Q52WX2 424 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 WDR45BQ5MNZ6 344 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 GIMAP6Q6P9H5 292 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 INO80CQ6PI98 192 aaPredicted RBP4.05□□□□□ -1.76
LRCH3-213ENST00000471667 MTHFD1LQ6UB35 978 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 ZNF761Q86XN6 746 aaPredicted RBP4.05□□□□□ -1.76
LRCH3-213ENST00000471667 MARCH9Q86YJ5 346 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 MMP21Q8N119 569 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 SLC34A3Q8N130 599 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 NETO2Q8NC67 525 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 RPLP0P6Q8NHW5 317 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 MBOAT7Q96N66 472 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 SEMA3CQ99985 751 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 P2RY13Q9BPV8 354 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 SENP7Q9BQF6 1050 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 MTA3Q9BTC8 594 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 NACAP1Q9BZK3 213 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 FSCN3Q9NQT6 498 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 CHST12Q9NRB3 414 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 THSD1Q9NS62 852 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 TM7SF3Q9NS93 570 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 SMPD4Q9NXE4 827 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 WHRNQ9P202 907 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 DNMT3BQ9UBC3 853 aaKnown RBP4.05□□□□□ -1.76
LRCH3-213ENST00000471667 DNAJB4Q9UDY4 337 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 FTSJ1Q9UET6 329 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 TPCN1Q9ULQ1 816 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 PCDHGB7Q9Y5F8 929 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 PCDHGB2Q9Y5G2 931 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 PCDHGA1Q9Y5H4 931 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 DOCK8Q8NF50 2099 aa4.05□□□□□ -1.76
LRCH3-213ENST00000471667 NAV3Q8IVL0 2385 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 A1L4Q6 167 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 WDR27A2RRH5 827 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 PPP1R11O60927 126 aaPredicted RBP4.04□□□□□ -1.76
LRCH3-213ENST00000471667 RECQL4O94761 1208 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 DDAH2O95865 285 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 APPP05067 770 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 C1SP09871 688 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 FCARP24071 287 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 DCTP40126 519 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 SEPHS1P49903 392 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 ZNF33AQ06730 810 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 SPIRE1Q08AE8 756 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 TARDBPQ13148 414 aaKnown RBP eCLIP4.04□□□□□ -1.76
LRCH3-213ENST00000471667 CDC37Q16543 378 aaPredicted RBP4.04□□□□□ -1.76
LRCH3-213ENST00000471667 DPY19L1Q2PZI1 675 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 ZNF394Q53GI3 561 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 GPATCH4Q5T3I0 446 aaKnown RBP4.04□□□□□ -1.76
LRCH3-213ENST00000471667 USP53Q70EK8 1073 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 MAMDC2Q7Z304 686 aaPredicted RBP4.04□□□□□ -1.76
LRCH3-213ENST00000471667 ERICH1Q86X53 443 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 CPNE8Q86YQ8 564 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 TMC8Q8IU68 726 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 METTL13Q8N6R0 699 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 OR2I1PQ8NGU4 316 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 TTC8Q8TAM2 541 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 ZBTB8AQ96BR9 441 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 RBM15Q96T37 977 aaKnown RBP eCLIP4.04□□□□□ -1.76
LRCH3-213ENST00000471667 MMS19Q96T76 1030 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 TTPALQ9BTX7 342 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 VN1R3Q9BXE9 311 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 KLHL25Q9H0H3 589 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 SLC25A18Q9H1K4 315 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 UBN1Q9NPG3 1134 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 HCFC1R1Q9NWW0 138 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 GTSE1Q9NYZ3 720 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 GULP1Q9UBP9 304 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 ANAPC2Q9UJX6 822 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 AKT3Q9Y243 479 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 WNT6Q9Y6F9 365 aa4.04□□□□□ -1.76
LRCH3-213ENST00000471667 TLN1Q9Y490 2541 aaKnown RBP4.04□□□□□ -1.76
LRCH3-213ENST00000471667 COL1A2P08123 1366 aa4.03□□□□□ -1.76
LRCH3-213ENST00000471667 LCTP09848 1927 aa4.03□□□□□ -1.76
LRCH3-213ENST00000471667 PLXNB3Q9ULL4 1909 aa4.03□□□□□ -1.76
LRCH3-213ENST00000471667 SF3B1O75533 1304 aaKnown RBP eCLIP4.03□□□□□ -1.763e-6■■■■■ 57.6
LRCH3-213ENST00000471667 ZBED9Q6R2W3 1325 aa4.03□□□□□ -1.76
LRCH3-213ENST00000471667 F8P00451 2351 aa4.03□□□□□ -1.76
LRCH3-213ENST00000471667 SPTBN1Q01082 2364 aaKnown RBP4.03□□□□□ -1.76
LRCH3-213ENST00000471667 GCOM1H8Y6P7 765 aaPredicted RBP4.03□□□□□ -1.76
LRCH3-213ENST00000471667 ARNTLO00327 626 aa4.03□□□□□ -1.76
LRCH3-213ENST00000471667 PRRG1O14668 218 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms