RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TAZQ16635 292 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 CA9Q16790 459 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 SLC25A52Q3SY17 297 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 PPM1LQ5SGD2 360 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 FAM102AQ5T9C2 384 aaPredicted RBP10.34□□□□□ -0.75
SF3A1-207ENST00000471342 TXNDC8Q6A555 127 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 KLHDC10Q6PID8 442 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 TMC5Q6UXY8 1006 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 GRASPQ7Z6J2 395 aaPredicted RBP10.34□□□□□ -0.75
SF3A1-207ENST00000471342 VPS36Q86VN1 386 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 ZSCAN30Q86W11 494 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 RNF10Q8N5U6 811 aaKnown RBP10.34□□□□□ -0.75
SF3A1-207ENST00000471342 SMRP1Q8NCR6 262 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 PABPC5Q96DU9 382 aaKnown RBP10.34□□□□□ -0.75
SF3A1-207ENST00000471342 HES6Q96HZ4 224 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 ADAM7Q9H2U9 754 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 SMOC2Q9H3U7 446 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 FBXO44Q9H4M3 255 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 IGFLR1Q9H665 355 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 POPDC2Q9HBU9 364 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 LZTFL1Q9NQ48 299 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 PIGVQ9NUD9 493 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 SFMBT1Q9UHJ3 866 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 STRIP2Q9ULQ0 834 aa10.34□□□□□ -0.75
SF3A1-207ENST00000471342 A0A1W2PRU2 124 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 IRAK2O43187 625 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 CEBPBP17676 345 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 COMTP21964 271 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 WEE1P30291 646 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 MAN1A1P33908 653 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 ALDH1A3P47895 512 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 TUBP50607 506 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 SEMA3BQ13214 749 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 TRIP4Q15650 581 aaPredicted RBP10.33□□□□□ -0.76
SF3A1-207ENST00000471342 EFHC1Q5JVL4 640 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 MEI1Q5TIA1 1274 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 MANEALQ5VSG8 457 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 RNF43Q68DV7 783 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 NADSYN1Q6IA69 706 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 C11orf63Q6NUN7 778 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 PPP1R2P3Q6NXS1 205 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 DNAJC24Q6P3W2 148 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 Q6ZNB5 142 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 RHOT2Q8IXI1 618 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 SLC35F6Q8N357 371 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 ADAM32Q8TC27 787 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 IPO4Q8TEX9 1081 aaKnown RBP10.33□□□□□ -0.76
SF3A1-207ENST00000471342 CTNNBL1Q8WYA6 563 aaPredicted RBP10.33□□□□□ -0.76
SF3A1-207ENST00000471342 TSC1Q92574 1164 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 FBXO32Q969P5 355 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 TRIM11Q96F44 468 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 PRMT1Q99873 361 aaKnown RBP10.33□□□□□ -0.76
SF3A1-207ENST00000471342 CNPY3Q9BT09 278 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 PDCL3Q9H2J4 239 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 SFXN1Q9H9B4 322 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 GKN1Q9NS71 199 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 ARHGEF38Q9NXL2 777 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 ZNF212Q9UDV6 495 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 ANAPC7Q9UJX3 599 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 CCL26Q9Y258 94 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 CEP83Q9Y592 693 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 BRWD1Q9NSI6 2320 aa10.33□□□□□ -0.76
SF3A1-207ENST00000471342 MACROD2A1Z1Q3 448 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 FAM72CH0Y354 149 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 MSI1O43347 362 aaKnown RBP10.32□□□□□ -0.76
SF3A1-207ENST00000471342 NCK2O43639 380 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 ZNF500O60304 480 aaPredicted RBP10.32□□□□□ -0.76
SF3A1-207ENST00000471342 PRAMEF12O95522 483 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 TRUB2O95900 331 aaKnown RBP10.32□□□□□ -0.76
SF3A1-207ENST00000471342 PDGFRAP16234 1089 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 PTPN2P17706 415 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 GPD1P21695 349 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 GABRR2P28476 465 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 MIPP30301 263 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 ELF1P32519 619 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 KCNQ1P51787 676 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 EPHB3P54753 998 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 RNASE9P60153 205 aaKnown RBP10.32□□□□□ -0.76
SF3A1-207ENST00000471342 SLC7A9P82251 487 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 ADCY2Q08462 1091 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 KIF5AQ12840 1032 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 TEAD2Q15562 447 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 DCAF6Q58WW2 860 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 RARS2Q5T160 578 aaKnown RBP10.32□□□□□ -0.76
SF3A1-207ENST00000471342 LIN9Q5TKA1 542 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 FAM72AQ5TYM5 149 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 FAM72DQ6L9T8 149 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 AADACL2Q6P093 401 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 STRADAQ7RTN6 431 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 FAM72BQ86X60 149 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 NPAS3Q8IXF0 933 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 FAM217AQ8IXS0 508 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 CCDC185Q8N715 623 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 NOX5Q96PH1 765 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 MYADMQ96S97 322 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 CORO1BQ9BR76 489 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 SELENOOQ9BVL4 669 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 APOL5Q9BWW9 433 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 DNAI2Q9GZS0 605 aa10.32□□□□□ -0.76
SF3A1-207ENST00000471342 PRDM6Q9NQX0 595 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms