RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 USP8P40818 1118 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 EIF2DP41214 584 aaKnown RBP14.82□□□□□ -0.04
TOP3B-215ENST00000470338 CXCL12P48061 93 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 GAD2Q05329 585 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 EFEMP1Q12805 493 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 NCAPHQ15003 741 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 FBXO43Q4G163 708 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 DENND1BQ6P3S1 775 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 MIB1Q86YT6 1006 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 FAM71AQ8IYT1 594 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 NAA15Q9BXJ9 866 aaKnown RBP14.82□□□□□ -0.04
TOP3B-215ENST00000470338 SLC4A5Q9BY07 1137 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 FAM126AQ9BYI3 521 aaPredicted RBP14.82□□□□□ -0.04
TOP3B-215ENST00000470338 VPS16Q9H269 839 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 SPHK2Q9NRA0 654 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 ABCC13Q9NSE7 274 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 OLA1Q9NTK5 396 aaKnown RBP14.82□□□□□ -0.04
TOP3B-215ENST00000470338 MARCH2Q9P0N8 246 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 LIMA1Q9UHB6 759 aaKnown RBP14.82□□□□□ -0.04
TOP3B-215ENST00000470338 RASAL2Q9UJF2 1139 aa14.82□□□□□ -0.04
TOP3B-215ENST00000470338 LSM7Q9UK45 103 aaKnown RBP14.82□□□□□ -0.04
TOP3B-215ENST00000470338 ZFHX2Q9C0A1 2572 aaPredicted RBP14.82□□□□□ -0.04
TOP3B-215ENST00000470338 A0A0A0MRY4 1105 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 CHURC1-FNTBB4DL54 471 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 HOXC11O43248 304 aaPredicted RBP14.81□□□□□ -0.04
TOP3B-215ENST00000470338 KLKB1P03952 638 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 ADH5P11766 374 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 ZNF18P17022 549 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 ACADSBP45954 432 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 SLC6A11P48066 632 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 MRE11P49959 708 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 SATB1Q01826 763 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 PTK2Q05397 1052 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 PPP2R5DQ14738 602 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 CAVIN1Q6NZI2 390 aaKnown RBP14.81□□□□□ -0.04
TOP3B-215ENST00000470338 TSSK4Q6SA08 328 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 RSRC2Q7L4I2 434 aaKnown RBP14.81□□□□□ -0.04
TOP3B-215ENST00000470338 TMEM110Q86TL2 294 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 ALYREFQ86V81 257 aaKnown RBP14.81□□□□□ -0.04
TOP3B-215ENST00000470338 TMEM25Q86YD3 366 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 CLEC4CQ8WTT0 213 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 DCLK3Q9C098 648 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 HSD3B7Q9H2F3 369 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 SEMA4AQ9H3S1 761 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 PLCB1Q9NQ66 1216 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 C2orf42Q9NWW7 574 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 CYTH4Q9UIA0 394 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 STRIP2Q9ULQ0 834 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 PCDHGC3Q9UN70 934 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 ZNF510Q9Y2H8 683 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 FHOD1Q9Y613 1164 aa14.81□□□□□ -0.04
TOP3B-215ENST00000470338 K7EQS6 105 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 PIK3R2O00459 728 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 ATG13O75143 517 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 RNF40O75150 1001 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 UCHL3P15374 230 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 COPB1P53618 953 aaKnown RBP14.8□□□□□ -0.04
TOP3B-215ENST00000470338 DRAP1Q14919 205 aaPredicted RBP14.8□□□□□ -0.04
TOP3B-215ENST00000470338 KLHL40Q2TBA0 621 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 MSANTD2Q6P1R3 559 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 PKN3Q6P5Z2 889 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 ZC3H14Q6PJT7 736 aaKnown RBP14.8□□□□□ -0.04
TOP3B-215ENST00000470338 C12orf40Q86WS4 652 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 SCUBE3Q8IX30 993 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 ETFBKMTQ8IXQ9 262 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 PHTF2Q8N3S3 785 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 WDTC1Q8N5D0 677 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 ZBTB44Q8NCP5 570 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 RNF139Q8WU17 664 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 EDEM1Q92611 657 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 PNKPQ96T60 521 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 BPIFA3Q9BQP9 254 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 LSM14BQ9BX40 385 aaKnown RBP14.8□□□□□ -0.04
TOP3B-215ENST00000470338 NAT10Q9H0A0 1025 aaKnown RBP14.8□□□□□ -0.04
TOP3B-215ENST00000470338 LHX5Q9H2C1 402 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 ZSCAN32Q9NX65 697 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 MARK1Q9P0L2 795 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 PCDHGA2Q9Y5H1 932 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 R4GN57 208 aa14.8□□□□□ -0.04
TOP3B-215ENST00000470338 SLC12A8A0AV02 714 aa14.79□□□□□ -0.04
TOP3B-215ENST00000470338 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.79□□□□□ -0.04
TOP3B-215ENST00000470338 K7ESF4 209 aa14.79□□□□□ -0.04
TOP3B-215ENST00000470338 LILRB5O75023 590 aa14.79□□□□□ -0.04
TOP3B-215ENST00000470338 LTFP02788 710 aa14.79□□□□□ -0.04
TOP3B-215ENST00000470338 FYNP06241 537 aa14.79□□□□□ -0.04
TOP3B-215ENST00000470338 TPM2P07951 284 aa14.79□□□□□ -0.04
TOP3B-215ENST00000470338 PNMA6AP0CW24 399 aaPredicted RBP14.79□□□□□ -0.04
TOP3B-215ENST00000470338 HOXA6P31267 233 aa14.79□□□□□ -0.04
TOP3B-215ENST00000470338 NRLP54845 237 aa14.79□□□□□ -0.04
TOP3B-215ENST00000470338 BPIFB4P59827 614 aa14.79□□□□□ -0.04
TOP3B-215ENST00000470338 MESP2Q0VG99 397 aa14.79□□□□□ -0.04
TOP3B-215ENST00000470338 TRIP4Q15650 581 aaPredicted RBP14.79□□□□□ -0.04
TOP3B-215ENST00000470338 ANO6Q4KMQ2 910 aa14.79□□□□□ -0.04
TOP3B-215ENST00000470338 APTXQ7Z2E3 356 aaKnown RBP14.79□□□□□ -0.04
TOP3B-215ENST00000470338 SLC47A2Q86VL8 602 aa14.79□□□□□ -0.04
TOP3B-215ENST00000470338 FMNL3Q8IVF7 1028 aa14.79□□□□□ -0.04
TOP3B-215ENST00000470338 CCDC26Q8TAB7 109 aa14.79□□□□□ -0.04
TOP3B-215ENST00000470338 NKD2Q969F2 451 aaPredicted RBP14.79□□□□□ -0.04
TOP3B-215ENST00000470338 PLD4Q96BZ4 506 aa14.79□□□□□ -0.04
TOP3B-215ENST00000470338 STK33Q9BYT3 514 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms